mkDepends is a script in CIMEROOT/scripts/Tools.
$ ./mkDepends --help SYNOPSIS mkDepends [-p [-Dmacro[=val]] [-Umacro] [-Idir]] [-d depfile] [-m mangle_scheme] [-t dir] [-w] Filepath Srcfiles OPTIONS -p Preprocess files (suffix .F and .F90) before searching for module dependencies. Default CPP preprocessor: cpp. Set env variables CPP and/or CPPFLAGS to override. -D macro[=val] Define the CPP macro with val as its value. Ignored when -p option is not active. -U macro Undefine the CPP macro. Ignored when -p option is not active. -I dir Add dir to the include path for CPP. Ignored when -p option is not active. -d depfile Additional file to be added to every .o dependence. -m mangle_scheme Method of mangling Fortran module names into .mod filenames. Allowed values are: lower - Filename is module_name.mod upper - Filename is MODULE_NAME.MOD The default is -m lower. -t dir Target directory. If this option is set the .o files that are targets in the dependency rules have the form dir/file.o. -w Print warnings to STDERR about files or dependencies not found. ARGUMENTS Filepath is the name of a file containing the directories (one per line) to be searched for dependencies. Srcfiles is the name of a file containing the names of files (one per line) for which dependencies will be generated.