Index

A

active or prognostic component add_attributes() (CIME.XML.namelist_definition.NamelistDefinition method) add_child() (CIME.XML.generic_xml.GenericXML method) add_comment() (CIME.XML.env_mach_pes.EnvMachPes method) add_default() (CIME.nmlgen.NamelistGenerator method) add_defaults_for_group() (CIME.nmlgen.NamelistGenerator method) add_elements_by_group() (CIME.XML.entry_id.EntryID method) add_failure() (CIME.expected_fails.ExpectedFails method) add_flag_to_cmd() (in module CIME.utils) add_mail_type_args() (in module CIME.utils) add_nmlcontents() (CIME.nmlgen.NamelistGenerator method) add_result() (CIME.XML.test_reporter.TestReporter method) add_test() (CIME.XML.env_test.EnvTest method) (CIME.XML.testspec.TestSpec method) allow_error() (CIME.XML.env_mach_specific.EnvMachSpecific method) analyze_build_log() (in module CIME.utils) append_case_status() (in module CIME.status) append_status() (in module CIME.status) append_status_cprnc_log() (in module CIME.compare_test_results) append_testlog() (in module CIME.status) append_to_user_nl_files() (in module CIME.SystemTests.test_utils.user_nl_utils) apply_user_mods() (CIME.case.case.Case method) (in module CIME.user_mod_support) Archive (class in CIME.XML.archive) archive directory (DOUT_S_ROOT)

archive_last_restarts() (CIME.case.case.Case method) (in module CIME.case.case_st_archive) archive_old_test_data() (in module CIME.jenkins_generic_job) ArchiveBase (class in CIME.XML.archive_base) arguments (CIME.tests.test_unit_compare_two.Call attribute) assert_called() (CIME.tests.utils.Mocker method) assert_called_with() (CIME.tests.utils.Mocker method) assert_calls_match() (CIME.tests.test_unit_case.TestCase_RecordCmd method) assert_core_phases() (CIME.tests.custom_assertions_test_status.CustomAssertionsTestStatus method) assert_dashboard_has_build() (CIME.tests.base.BaseTestCase method) assert_grid_info_f09_g17() (CIME.tests.test_unit_grids.TestGrids method) assert_grid_info_f09_g17_3glc() (CIME.tests.test_unit_grids.TestGrids method) assert_num_expected_unexpected_fails() (CIME.tests.custom_assertions_test_status.CustomAssertionsTestStatus method) assert_num_leftovers() (CIME.tests.test_sys_jenkins_generic_job.TestJenkinsGenericJob method) assert_phase_absent() (CIME.tests.custom_assertions_test_status.CustomAssertionsTestStatus method) assert_status_of_phase() (CIME.tests.custom_assertions_test_status.CustomAssertionsTestStatus method) assert_test_status() (CIME.tests.base.BaseTestCase method) assert_variable_equals() (CIME.tests.utils.CMakeTester method) (CIME.tests.utils.MakefileTester method) assert_variable_matches() (CIME.tests.utils.CMakeTester method) (CIME.tests.utils.MakefileTester method) assertFileContentsEqual() (CIME.tests.test_unit_user_nl_utils.TestUserNLCopier method) assertMatchAllLines() (CIME.tests.test_unit_utils.TestUtils method) assertResults() (CIME.tests.test_unit_user_mod_support.TestUserModSupport method) attrib() (CIME.XML.generic_xml.GenericXML method)

B

baseline baseline failure BaseTestCase (class in CIME.tests.base) Batch (class in CIME.XML.batch) batch_jobid() (in module CIME.utils) bless_history() (in module CIME.bless_test_results) bless_namelists() (in module CIME.bless_test_results) bless_test_results() (in module CIME.bless_test_results) blessing build directory (EXEROOT) build() (CIME.SystemTests.system_tests_common.SystemTestsCommon method) build_cime_component_lib() (in module CIME.buildlib) build_include_dirs_list() (in module CIME.user_mod_support) build_indv() (CIME.SystemTests.system_tests_common.SystemTestsCommon method) build_phase() (CIME.SystemTests.funit.FUNIT method) (CIME.SystemTests.hommebaseclass.HommeBase method) (CIME.SystemTests.icp.ICP method) (CIME.SystemTests.mvk.MVK method) (CIME.SystemTests.pgn.PGN method) (CIME.SystemTests.system_tests_common.FakeTest method) (CIME.SystemTests.system_tests_common.SystemTestsCommon method) (CIME.SystemTests.system_tests_common.TESTBUILDFAIL method) (CIME.SystemTests.system_tests_common.TESTMEMLEAKFAIL method) (CIME.SystemTests.system_tests_common.TESTMEMLEAKPASS method) (CIME.SystemTests.system_tests_common.TESTRUNDIFF method) (CIME.SystemTests.system_tests_common.TESTRUNFAIL method) (CIME.SystemTests.system_tests_common.TESTRUNPASS method) (CIME.SystemTests.system_tests_common.TESTRUNSLOWPASS method) (CIME.SystemTests.system_tests_common.TESTRUNUSERXMLCHANGE method) (CIME.SystemTests.system_tests_common.TESTTESTDIFF method) (CIME.SystemTests.system_tests_compare_n.SystemTestsCompareN method) (CIME.SystemTests.system_tests_compare_two.SystemTestsCompareTwo method) (CIME.SystemTests.tsc.TSC method)

build_xcpl_nml() (in module CIME.buildnml)

C

Call (class in CIME.tests.test_unit_compare_two) calls (CIME.tests.utils.Mocker property) cancel_batch_jobs() (CIME.case.case.Case method) cancel_job() (CIME.XML.env_batch.EnvBatch method) case (CASE) Case (class in CIME.case.case) case root (CASEROOT) case_build() (in module CIME.build) case_cmpgen_namelists() (CIME.case.case.Case method) (in module CIME.case.case_cmpgen_namelists) case_run() (CIME.case.case.Case method) (in module CIME.case.case_run) case_setup() (CIME.case.case.Case method) (CIME.tests.case_fake.CaseFake method) (in module CIME.case.case_setup) case_st_archive() (CIME.case.case.Case method) (in module CIME.case.case_st_archive) case_test() (CIME.case.case.Case method) (in module CIME.case.case_test) CaseFake (class in CIME.tests.case_fake) CaseInsensitiveDict (class in CIME.XML.namelist_definition) change_file() (CIME.XML.env_base.EnvBase method) (CIME.XML.generic_xml.GenericXML method) character_literal_to_string() (in module CIME.namelist) chdir() (in module CIME.tests.utils) check_all_input_data() (CIME.case.case.Case method) (in module CIME.case.check_input_data) check_case() (CIME.case.case.Case method) (in module CIME.case.case_submit) check_code() (in module CIME.code_checker) check_DA_settings() (CIME.case.case.Case method) (in module CIME.case.case_submit) check_diff() (in module CIME.locked_files) check_if_comp_var() (CIME.case.case.Case method) (CIME.XML.entry_id.EntryID method) (CIME.XML.env_base.EnvBase method) (CIME.XML.pio.PIO method) check_input_data() (CIME.case.case.Case method) (in module CIME.case.check_input_data) check_lockedfile() (in module CIME.locked_files) check_lockedfiles() (in module CIME.locked_files) check_minimum_python_version() (in module CIME.Tools.standard_script_setup) (in module Tools.standard_script_setup) check_name() (in module CIME.utils) check_timestamp() (CIME.XML.generic_xml.GenericXML method) check_timestamps() (CIME.case.case.Case method) CIME module CIME root (CIMEROOT) CIME.aprun module CIME.baselines module CIME.baselines.performance module CIME.bless_test_results module CIME.build module CIME.build_scripts module CIME.buildlib module CIME.buildnml module CIME.BuildTools module CIME.BuildTools.configure module CIME.case module CIME.case.case module CIME.case.case_clone module CIME.case.case_cmpgen_namelists module CIME.case.case_run module CIME.case.case_setup module CIME.case.case_st_archive module CIME.case.case_submit module CIME.case.case_test module CIME.case.check_input_data module CIME.case.preview_namelists module CIME.code_checker module CIME.compare_namelists module CIME.compare_test_results module CIME.config module CIME.cs_status module CIME.cs_status_creator module CIME.data module CIME.data.config module CIME.data.templates module CIME.date module CIME.expected_fails module CIME.get_tests module CIME.get_timing module CIME.gitinterface module CIME.hist_utils module CIME.jenkins_generic_job module CIME.locked_files module CIME.namelist module CIME.nmlgen module CIME.provenance module CIME.scripts module CIME.scripts.create_clone module CIME.scripts.create_newcase module CIME.scripts.create_test module CIME.scripts.query_config module CIME.scripts.query_testlists module CIME.Servers module CIME.Servers.ftp module CIME.Servers.generic_server module CIME.Servers.gftp module CIME.Servers.svn module CIME.Servers.wget module CIME.simple_compare module CIME.status module CIME.SystemTests module CIME.SystemTests.dae module CIME.SystemTests.eri module CIME.SystemTests.erio module CIME.SystemTests.erp module CIME.SystemTests.err module CIME.SystemTests.erri module CIME.SystemTests.ers module CIME.SystemTests.ers2 module CIME.SystemTests.ert module CIME.SystemTests.funit module CIME.SystemTests.homme module CIME.SystemTests.hommebaseclass module CIME.SystemTests.hommebfb module CIME.SystemTests.icp module CIME.SystemTests.irt module CIME.SystemTests.ldsta module CIME.SystemTests.mcc module CIME.SystemTests.mvk module CIME.SystemTests.nck module CIME.SystemTests.ncr module CIME.SystemTests.nodefail module CIME.SystemTests.pea module CIME.SystemTests.pem module CIME.SystemTests.pet module CIME.SystemTests.pfs module CIME.SystemTests.pgn module CIME.SystemTests.pre module CIME.SystemTests.rep module CIME.SystemTests.restart_tests module CIME.SystemTests.reuseinitfiles module CIME.SystemTests.seq module CIME.SystemTests.sms module CIME.SystemTests.system_tests_common module CIME.SystemTests.system_tests_compare_n module CIME.SystemTests.system_tests_compare_two module CIME.SystemTests.test_mods module CIME.SystemTests.test_utils module CIME.SystemTests.test_utils.user_nl_utils module CIME.SystemTests.tsc module CIME.test_scheduler module CIME.test_status module CIME.test_utils module CIME.tests module CIME.tests.base module CIME.tests.case_fake module CIME.tests.custom_assertions_test_status module CIME.tests.scripts_regression_tests module CIME.tests.test_sys_bless_tests_results module CIME.tests.test_sys_build_system module CIME.tests.test_sys_cime_case module CIME.tests.test_sys_cime_performance module CIME.tests.test_sys_create_newcase module CIME.tests.test_sys_full_system module CIME.tests.test_sys_grid_generation module CIME.tests.test_sys_jenkins_generic_job module CIME.tests.test_sys_manage_and_query module

CIME.tests.test_sys_query_config module CIME.tests.test_sys_run_restart module CIME.tests.test_sys_save_timings module CIME.tests.test_sys_single_submit module CIME.tests.test_sys_test_scheduler module CIME.tests.test_sys_unittest module CIME.tests.test_sys_user_concurrent_mods module CIME.tests.test_sys_wait_for_tests module CIME.tests.test_unit_aprun module CIME.tests.test_unit_baselines_performance module CIME.tests.test_unit_bless_test_results module CIME.tests.test_unit_case module CIME.tests.test_unit_case_fake module CIME.tests.test_unit_case_run module CIME.tests.test_unit_case_setup module CIME.tests.test_unit_compare_test_results module CIME.tests.test_unit_compare_two module CIME.tests.test_unit_config module CIME.tests.test_unit_cs_status module CIME.tests.test_unit_custom_assertions_test_status module CIME.tests.test_unit_doctest module CIME.tests.test_unit_expected_fails_file module CIME.tests.test_unit_grids module CIME.tests.test_unit_hist_utils module CIME.tests.test_unit_locked_files module CIME.tests.test_unit_nmlgen module CIME.tests.test_unit_paramgen module CIME.tests.test_unit_system_tests module CIME.tests.test_unit_system_tests_mvk module CIME.tests.test_unit_test_status module CIME.tests.test_unit_two_link_to_case2_output module CIME.tests.test_unit_user_mod_support module CIME.tests.test_unit_user_nl_utils module CIME.tests.test_unit_utils module CIME.tests.test_unit_xml_archive_base module CIME.tests.test_unit_xml_env_batch module CIME.tests.test_unit_xml_env_mach_specific module CIME.tests.test_unit_xml_grids module CIME.tests.test_unit_xml_machines module CIME.tests.test_unit_xml_namelist_definition module CIME.tests.test_unit_xml_tests module CIME.tests.utils module CIME.Tools module CIME.Tools.generate_cylc_workflow module CIME.Tools.standard_script_setup module CIME.Tools.testreporter module CIME.user_mod_support module CIME.utils module CIME.wait_for_tests module CIME.XML module CIME.XML.archive module CIME.XML.archive_base module CIME.XML.batch module CIME.XML.component module CIME.XML.compsets module CIME.XML.entry_id module CIME.XML.env_archive module CIME.XML.env_base module CIME.XML.env_batch module CIME.XML.env_build module CIME.XML.env_case module CIME.XML.env_mach_pes module CIME.XML.env_mach_specific module CIME.XML.env_run module CIME.XML.env_test module CIME.XML.env_workflow module CIME.XML.expected_fails_file module CIME.XML.files module CIME.XML.generic_xml module CIME.XML.grids module CIME.XML.headers module CIME.XML.inputdata module CIME.XML.machines module CIME.XML.namelist_definition module CIME.XML.pes module CIME.XML.pio module CIME.XML.standard_module_setup module CIME.XML.stream module CIME.XML.test_reporter module CIME.XML.testlist module CIME.XML.tests module CIME.XML.testspec module CIME.XML.workflow module CIMEError clean() (in module CIME.build) clean_build() (CIME.SystemTests.system_tests_common.SystemTestsCommon method) clean_groups() (CIME.namelist.Namelist method) clean_streams() (CIME.nmlgen.NamelistGenerator method) clean_up_lookups() (CIME.case.case.Case method) cleanup() (in module CIME.tests.scripts_regression_tests) cleanup_queue() (in module CIME.jenkins_generic_job) cleanupnode() (CIME.XML.entry_id.EntryID method) (CIME.XML.env_base.EnvBase method) (CIME.XML.env_batch.EnvBatch method) (CIME.XML.env_test.EnvTest method) clear_folder() (in module CIME.utils) CMakeTester (class in CIME.tests.utils) CmakeTmpBuildDir (class in CIME.build) compare_baseline() (in module CIME.hist_utils) compare_env_run() (CIME.SystemTests.system_tests_common.SystemTestsCommon method) compare_files() (in module CIME.simple_compare) compare_history() (in module CIME.compare_test_results) compare_namelist_files() (in module CIME.compare_namelists) compare_namelists() (in module CIME.compare_test_results) compare_runconfigfiles() (in module CIME.simple_compare) compare_test() (in module CIME.hist_utils) compare_test_results() (in module CIME.compare_test_results) compare_xml() (CIME.XML.entry_id.EntryID method) (CIME.XML.env_batch.EnvBatch method) component Component (class in CIME.XML.component) component set (COMPSET) compress_literal_list() (in module CIME.namelist) Compsets (class in CIME.XML.compsets) compute_total_time() (in module CIME.utils) Config (class in CIME.config) config_get_value() (CIME.gitinterface.GitInterface method) config_set_value() (CIME.gitinterface.GitInterface method) ConfigBase (class in CIME.config) configure() (CIME.case.case.Case method) (in module CIME.BuildTools.configure) configure_logging() (in module CIME.utils) configure_tests() (in module CIME.tests.scripts_regression_tests) confirm_group_is_empty() (CIME.nmlgen.NamelistGenerator method) convert_bool() (in module CIME.namelist) convert_to_babylonian_time() (in module CIME.utils) convert_to_seconds() (in module CIME.utils) convert_to_string() (in module CIME.utils) convert_to_type() (in module CIME.utils) convert_to_unknown_type() (in module CIME.utils) copy() (CIME.case.case.Case method) (CIME.tests.case_fake.CaseFake method) (CIME.XML.generic_xml.GenericXML method) copy_case1_restarts_to_case2() (CIME.SystemTests.system_tests_compare_two.SystemTestsCompareTwo method) copy_depends_files() (in module CIME.BuildTools.configure) copy_globs() (in module CIME.utils) copy_histfiles() (in module CIME.hist_utils) copy_inputs_to_rundir() (in module CIME.buildnml) copy_local_macros_to_dir() (in module CIME.utils) copyifnewer() (in module CIME.utils) count_test_data() (in module CIME.scripts.query_testlists) coupler cprnc() (in module CIME.hist_utils) create() (CIME.case.case.Case method) create_batch_system() (in module CIME.tests.test_unit_locked_files) create_caseroot() (CIME.case.case.Case method) create_cdash_build_xml() (in module CIME.wait_for_tests) create_cdash_config_xml() (in module CIME.wait_for_tests) create_cdash_test_xml() (in module CIME.wait_for_tests) create_cdash_upload_xml() (in module CIME.wait_for_tests) create_cdash_xml() (in module CIME.wait_for_tests) create_cdash_xml_boiler() (in module CIME.wait_for_tests) create_cdash_xml_fakes() (in module CIME.wait_for_tests) create_clone() (CIME.case.case.Case method) (CIME.tests.case_fake.CaseFake method) (in module CIME.case.case_clone) create_complex_case() (in module CIME.tests.test_unit_system_tests_mvk) create_cs_status() (in module CIME.cs_status_creator) create_dirs() (CIME.case.case.Case method) (in module CIME.case.preview_namelists) create_fake_env() (in module CIME.tests.test_unit_locked_files) create_file_in_rundir2() (CIME.tests.test_unit_two_link_to_case2_output.TestLinkToCase2Output method) create_job_groups() (CIME.XML.env_batch.EnvBatch method) (CIME.XML.env_workflow.EnvWorkflow method) create_machines_dir() (in module CIME.tests.test_unit_case_setup) create_mock_case() (in module CIME.tests.test_unit_baselines_performance) (in module CIME.tests.test_unit_system_tests) create_namelist_infile() (in module CIME.buildnml) create_namelists() (CIME.case.case.Case method) (in module CIME.case.preview_namelists) create_shr_strdata_nml() (CIME.nmlgen.NamelistGenerator method) create_simple_case() (in module CIME.tests.test_unit_system_tests_mvk) create_stream_file_and_update_shr_strdata_nml() (CIME.nmlgen.NamelistGenerator method) create_test() (in module CIME.scripts.create_test) create_test_dir() (CIME.tests.test_unit_cs_status.TestCsStatus method) create_test_file() (CIME.tests.test_unit_utils.TestFileContainsPythonFunction method) create_test_status_core_passes() (CIME.tests.test_unit_cs_status.TestCsStatus static method) createUserMod() (CIME.tests.test_unit_user_mod_support.TestUserModSupport method) cs_status() (in module CIME.cs_status) current_is() (CIME.test_status.TestStatus method) CustomAssertionsTestStatus (class in CIME.tests.custom_assertions_test_status) cylc_batch_job_template() (in module CIME.Tools.generate_cylc_workflow) (in module Tools.generate_cylc_workflow) cylc_get_case_path_string() (in module CIME.Tools.generate_cylc_workflow) (in module Tools.generate_cylc_workflow) cylc_get_ensemble_first_and_last() (in module CIME.Tools.generate_cylc_workflow) (in module Tools.generate_cylc_workflow) cylc_script_job_template() (in module CIME.Tools.generate_cylc_workflow) (in module Tools.generate_cylc_workflow)

D

DAE (class in CIME.SystemTests.dae) data component date (class in CIME.date) day() (CIME.date.date method) delete_old_test_data() (in module CIME.jenkins_generic_job) delete_variable() (CIME.namelist.Namelist method)

deprecate_action() (in module CIME.utils) dict_to_namelist() (CIME.XML.namelist_definition.NamelistDefinition method) diff_lockedfile() (in module CIME.locked_files) DISABLE_CACHING (CIME.XML.generic_xml.GenericXML attribute) does_file_have_string() (in module CIME.utils) driver DummyCase (class in CIME.tests.test_unit_paramgen)

E

EntryID (class in CIME.XML.entry_id) EnvArchive (class in CIME.XML.env_archive) EnvBase (class in CIME.XML.env_base) EnvBatch (class in CIME.XML.env_batch) EnvBuild (class in CIME.XML.env_build) EnvCase (class in CIME.XML.env_case) EnvironmentContext (class in CIME.utils) EnvMachPes (class in CIME.XML.env_mach_pes) EnvMachSpecific (class in CIME.XML.env_mach_specific) EnvRun (class in CIME.XML.env_run) EnvTest (class in CIME.XML.env_test) EnvWorkflow (class in CIME.XML.env_workflow) ERI (class in CIME.SystemTests.eri) ERIO (class in CIME.SystemTests.erio)

ERP (class in CIME.SystemTests.erp) ERR (class in CIME.SystemTests.err) ERRI (class in CIME.SystemTests.erri) ERS (class in CIME.SystemTests.ers) ERS2 (class in CIME.SystemTests.ers2) ERT (class in CIME.SystemTests.ert) ESP evv_test_config() (CIME.SystemTests.mvk.MVKConfig method) exclude_testing() (CIME.XML.archive_base.ArchiveBase method) expand_literal_list() (in module CIME.namelist) expect() (in module CIME.utils) expected_fails_comment() (CIME.expected_fails.ExpectedFails method) ExpectedFails (class in CIME.expected_fails) ExpectedFailsFile (class in CIME.XML.expected_fails_file)

F

FakeCase (class in CIME.BuildTools.configure) FakeTest (class in CIME.SystemTests.system_tests_common) FAST_ONLY (CIME.tests.base.BaseTestCase attribute) file_contains_python_function() (in module CIME.utils) fileexists() (CIME.Servers.ftp.FTP method) (CIME.Servers.generic_server.GenericServer method) (CIME.Servers.gftp.GridFTP method) (CIME.Servers.svn.SVN method) (CIME.Servers.wget.WGET method) Files (class in CIME.XML.files) filter_unicode() (in module CIME.utils) find_files() (in module CIME.utils) find_pes_layout() (CIME.XML.pes.Pes method) find_proc_id() (in module CIME.utils) find_system_test() (in module CIME.utils)

find_test_mods() (in module CIME.SystemTests.test_mods) findDiff() (in module CIME.simple_compare) fix_single_exe_case() (in module CIME.SystemTests.system_tests_common) fix_sys_argv_quotes() (CIME.case.case.Case method) fixup_sys_path() (in module CIME.utils) flush() (CIME.case.case.Case method) (CIME.test_status.TestStatus method) (CIME.tests.case_fake.CaseFake method) forcing format() (CIME.utils.IndentFormatter method) format_time() (in module CIME.utils) fortran_namelist_base_value() (in module CIME.namelist) FTP (class in CIME.Servers.ftp) ftp_login() (CIME.Servers.ftp.FTP class method) FUNIT (class in CIME.SystemTests.funit)

G

generate_baseline() (in module CIME.hist_utils) generate_env_mach_specific() (in module CIME.BuildTools.configure) generate_makefile_macro() (in module CIME.build) generate_namelist() (CIME.SystemTests.mvk.MVKConfig method) generate_teststatus() (in module CIME.hist_utils) GenericServer (class in CIME.Servers.generic_server) GenericXML (class in CIME.XML.generic_xml) GenericXML.CacheEntry (class in CIME.XML.generic_xml) get() (CIME.XML.generic_xml.GenericXML method) (CIME.XML.namelist_definition.CaseInsensitiveDict method) get_all_checkable_files() (in module CIME.code_checker) get_all_cime_models() (in module CIME.utils) get_all_config_archive_files() (CIME.XML.archive.Archive method) get_all_hist_files() (CIME.XML.archive_base.ArchiveBase method) get_all_queues() (CIME.XML.env_batch.EnvBatch method) get_aprun_args() (CIME.XML.env_mach_specific.EnvMachSpecific method) get_aprun_cmd_for_case() (in module CIME.aprun) get_aprun_mode() (CIME.XML.env_mach_specific.EnvMachSpecific method) get_attributes() (CIME.XML.namelist_definition.NamelistDefinition method) get_baseline_dir() (CIME.case.case.Case method) get_batch_directives() (CIME.XML.env_batch.EnvBatch method) get_batch_jobs() (CIME.case.case.Case method) (CIME.XML.batch.Batch method) get_batch_mail_type() (CIME.XML.env_batch.EnvBatch method) get_batch_script_for_job() (in module CIME.utils) get_batch_system() (CIME.XML.batch.Batch method) get_batch_system_type() (CIME.XML.env_batch.EnvBatch method) get_build_groups() (in module CIME.get_tests) get_build_threaded() (CIME.BuildTools.configure.FakeCase method) (CIME.case.case.Case method) get_case_root() (CIME.BuildTools.configure.FakeCase method) (CIME.case.case.Case method) get_casedir() (CIME.tests.base.BaseTestCase method) get_caseroots() (CIME.tests.test_unit_compare_two.TestSystemTestsCompareTwo method) get_charge_account() (in module CIME.utils) get_child() (CIME.XML.generic_xml.GenericXML method) (CIME.XML.machines.Machines method) get_child_content() (CIME.XML.entry_id.EntryID method) get_children() (CIME.XML.env_base.EnvBase method) (CIME.XML.env_batch.EnvBatch method) (CIME.XML.env_workflow.EnvWorkflow method) (CIME.XML.generic_xml.GenericXML method) get_cime_config() (in module CIME.utils) get_cime_default_driver() (in module CIME.utils) get_cime_root() (in module CIME.utils) get_comment() (CIME.test_status.TestStatus method) get_compare_phase_name() (CIME.tests.test_unit_compare_two.TestSystemTestsCompareTwo method) get_component_classes() (in module CIME.scripts.query_config) get_components() (CIME.XML.files.Files method) (in module CIME.scripts.query_config) get_compset_active_components() (in module CIME.scripts.query_config) get_compset_components() (CIME.case.case.Case method) get_compset_longnames() (CIME.XML.compsets.Compsets method) get_compset_match() (CIME.XML.compsets.Compsets method) get_compset_var_settings() (CIME.case.case.Case method) (CIME.XML.compsets.Compsets method) get_config_path() (in module CIME.utils) get_cpl_mem_usage() (in module CIME.baselines.performance) get_cpl_throughput() (in module CIME.baselines.performance) get_current_branch() (in module CIME.utils) get_current_commit() (in module CIME.utils) get_current_submodule_status() (in module CIME.utils) get_default() (CIME.nmlgen.NamelistGenerator method) get_default_compiler() (CIME.tests.utils.MockMachines method) (CIME.XML.machines.Machines method) get_default_MPIlib() (CIME.tests.utils.MockMachines method) (CIME.XML.machines.Machines method) get_default_queue() (CIME.XML.env_batch.EnvBatch method) get_default_setting() (in module CIME.scripts.create_test) get_default_tests() (CIME.tests.test_sys_test_scheduler.TestTestScheduler method) get_default_value() (CIME.XML.entry_id.EntryID method) (CIME.XML.namelist_definition.NamelistDefinition method) get_defaults() (CIME.XML.pio.PIO method) get_description() (CIME.XML.component.Component method) (CIME.XML.entry_id.EntryID method) get_element_text() (CIME.XML.generic_xml.GenericXML method) get_elements_from_child_content() (CIME.XML.entry_id.EntryID method) get_entries() (CIME.XML.env_archive.EnvArchive method) get_entry() (CIME.XML.archive_base.ArchiveBase method) get_entry_attributes() (CIME.XML.archive_base.ArchiveBase method) get_entry_info() (CIME.XML.env_archive.EnvArchive method) get_entry_nodes() (CIME.XML.namelist_definition.NamelistDefinition method) get_entry_value() (CIME.XML.archive_base.ArchiveBase method) get_env() (CIME.case.case.Case method) get_expected_fails() (CIME.XML.expected_fails_file.ExpectedFailsFile method) get_extra_machines_dir() (CIME.XML.machines.Machines method) get_field_from_list() (CIME.XML.machines.Machines method) get_file_date() (in module CIME.date) get_first_child_nodes() (CIME.XML.machines.Machines method) get_first_job() (CIME.case.case.Case method) get_forcing_description() (CIME.XML.component.Component method) get_fortran_name_only() (in module CIME.namelist) get_fortran_variable_indices() (in module CIME.namelist) get_full_test_name() (in module CIME.utils) get_full_test_names() (in module CIME.get_tests) get_full_tmpdir() (CIME.build.CmakeTmpBuildDir method) get_grid_info() (CIME.XML.grids.Grids method) get_grid_longname() (CIME.XML.grids.Grids method) get_group() (CIME.XML.namelist_definition.NamelistDefinition method) get_group_name() (CIME.XML.namelist_definition.NamelistDefinition method) get_group_names() (CIME.namelist.Namelist method) get_group_variables() (CIME.namelist.Namelist method) (CIME.nmlgen.NamelistGenerator method) get_groups() (CIME.XML.entry_id.EntryID method) get_header_node() (CIME.XML.headers.Headers method) get_hist_file_ext_regexes() (CIME.XML.archive_base.ArchiveBase method) get_hist_file_extensions() (CIME.XML.archive_base.ArchiveBase method) get_histfiles_for_restarts() (in module CIME.case.case_st_archive) get_htmlroot() (in module CIME.utils) get_id() (CIME.XML.generic_xml.GenericXML method) get_input_pathname() (CIME.XML.namelist_definition.NamelistDefinition method) get_job_deps() (in module CIME.XML.env_batch) get_job_id() (CIME.case.case.Case method) (CIME.XML.env_batch.EnvBatch method) get_job_info() (CIME.case.case.Case method) get_job_overrides() (CIME.XML.env_batch.EnvBatch method) get_job_specs() (CIME.XML.env_workflow.EnvWorkflow method) get_jobs() (CIME.XML.env_batch.EnvBatch method) (CIME.XML.env_workflow.EnvWorkflow method) get_latest_cpl_log() (CIME.case.case.Case method) get_latest_cpl_logs() (in module CIME.baselines.performance) get_latest_hist_files() (CIME.XML.archive_base.ArchiveBase method) get_latest_phase() (CIME.test_status.TestStatus method) get_lids() (in module CIME.utils) get_logging_options() (in module CIME.utils) get_machine_name() (CIME.tests.utils.MockMachines method) (CIME.XML.machines.Machines method) get_machines_dir() (CIME.XML.machines.Machines method) get_makefile_vars() (CIME.build.CmakeTmpBuildDir method) get_max_thread_count() (CIME.XML.env_mach_pes.EnvMachPes method)

get_model() (in module CIME.utils) get_model_config_location_within_cime() (in module CIME.utils) get_model_config_root() (in module CIME.utils) get_module_system_cmd_path() (CIME.XML.env_mach_specific.EnvMachSpecific method) get_module_system_init_path() (CIME.XML.env_mach_specific.EnvMachSpecific method) get_module_system_type() (CIME.XML.env_mach_specific.EnvMachSpecific method) get_mpirun() (CIME.XML.env_mach_specific.EnvMachSpecific method) get_mpirun_cmd() (CIME.case.case.Case method) get_name() (CIME.test_status.TestStatus method) get_next_server() (CIME.XML.inputdata.Inputdata method) get_nml_diff() (in module CIME.wait_for_tests) get_node_element_info() (CIME.XML.entry_id.EntryID method) get_node_names() (CIME.XML.machines.Machines method) get_nodes_by_id() (CIME.XML.entry_id.EntryID method) (CIME.XML.env_base.EnvBase method) get_optional_batch_node() (CIME.XML.batch.Batch method) get_optional_child() (CIME.XML.generic_xml.GenericXML method) get_overall_test_status() (CIME.test_status.TestStatus method) get_overrides_nodes() (CIME.XML.env_mach_specific.EnvMachSpecific method) get_per_stream_entries() (CIME.XML.namelist_definition.NamelistDefinition method) get_primary_component() (CIME.case.case.Case method) get_primary_job() (CIME.case.case.Case method) get_project() (in module CIME.utils) get_python_libs_location_within_cime() (in module CIME.utils) get_queue_specs() (CIME.XML.env_batch.EnvBatch method) get_raw_record() (CIME.XML.generic_xml.GenericXML method) get_recommended_test_time() (in module CIME.get_tests) get_recommended_test_time_based_on_past() (in module CIME.provenance) get_record_fields() (CIME.case.case.Case method) get_resolved_value() (CIME.case.case.Case method) (CIME.XML.generic_xml.GenericXML method) get_rest_file_extensions() (CIME.XML.archive_base.ArchiveBase method) get_rpointer_contents() (CIME.XML.env_archive.EnvArchive method) get_schema() (CIME.XML.files.Files method) get_schema_path() (in module CIME.utils) get_scripts_root() (in module CIME.utils) get_settings_for_phase() (CIME.XML.env_test.EnvTest method) get_spare_nodes() (CIME.XML.env_mach_pes.EnvMachPes method) get_src_root() (in module CIME.utils) get_standard_cmake_args() (in module CIME.build) get_standard_makefile_args() (in module CIME.build) get_status() (CIME.test_status.TestStatus method) (CIME.XML.env_batch.EnvBatch method) get_step_phase_cnt() (CIME.XML.env_test.EnvTest method) get_streams() (CIME.nmlgen.NamelistGenerator method) get_submit_args() (CIME.XML.env_batch.EnvBatch method) get_suffix() (CIME.XML.machines.Machines method) get_tasks_per_node() (CIME.XML.env_mach_pes.EnvMachPes method) get_template_path() (in module CIME.utils) get_test_data() (in module CIME.get_tests) get_test_node() (CIME.XML.tests.Tests method) get_test_output() (in module CIME.wait_for_tests) get_test_parameter() (CIME.XML.env_test.EnvTest method) get_test_phase() (in module CIME.wait_for_tests) get_test_spec_dir() (CIME.SystemTests.funit.FUNIT method) get_test_status_files() (in module CIME.test_utils) get_test_success() (in module CIME.provenance) get_test_suite() (in module CIME.get_tests) get_test_suites() (in module CIME.get_tests) get_test_time() (in module CIME.wait_for_tests) get_testnames() (CIME.test_scheduler.TestScheduler method) get_testreporter_xml() (in module CIME.Tools.testreporter) (in module Tools.testreporter) get_tests() (CIME.XML.testlist.Testlist method) get_tests_from_xml() (in module CIME.test_utils) get_time_in_seconds() (in module CIME.utils) get_timestamp() (in module CIME.utils) get_timing() (in module CIME.get_timing) get_tools_path() (in module CIME.utils) get_total_nodes() (CIME.XML.env_mach_pes.EnvMachPes method) get_total_tasks() (CIME.XML.env_mach_pes.EnvMachPes method) get_ts_synopsis() (in module CIME.hist_utils) get_type_info() (CIME.case.case.Case method) (CIME.XML.entry_id.EntryID method) (CIME.XML.env_archive.EnvArchive method) (CIME.XML.env_batch.EnvBatch method) (CIME.XML.env_mach_specific.EnvMachSpecific method) (CIME.XML.env_workflow.EnvWorkflow method) get_umask() (in module CIME.utils) get_urlroot() (in module CIME.utils) get_valid_model_components() (CIME.XML.component.Component method) get_valid_value_string() (CIME.XML.entry_id.EntryID method) get_valid_values() (CIME.XML.entry_id.EntryID method) get_value() (CIME.BuildTools.configure.FakeCase method) (CIME.case.case.Case method) (CIME.namelist.Namelist method) (CIME.nmlgen.NamelistGenerator method) (CIME.tests.case_fake.CaseFake method) (CIME.tests.test_unit_paramgen.DummyCase method) (CIME.tests.utils.MockMachines method) (CIME.XML.batch.Batch method) (CIME.XML.component.Component method) (CIME.XML.compsets.Compsets method) (CIME.XML.entry_id.EntryID method) (CIME.XML.env_base.EnvBase method) (CIME.XML.env_batch.EnvBatch method) (CIME.XML.env_mach_pes.EnvMachPes method) (CIME.XML.env_run.EnvRun method) (CIME.XML.env_test.EnvTest method) (CIME.XML.env_workflow.EnvWorkflow method) (CIME.XML.files.Files method) (CIME.XML.generic_xml.GenericXML method) (CIME.XML.machines.Machines method) (CIME.XML.stream.Stream method) get_value_match() (CIME.XML.entry_id.EntryID method) (CIME.XML.namelist_definition.NamelistDefinition method) get_values() (CIME.case.case.Case method) (CIME.XML.entry_id.EntryID method) (CIME.XML.generic_xml.GenericXML method) get_var_list() (CIME.SystemTests.pgn.PGN method) get_variable_names() (CIME.namelist.Namelist method) get_variable_value() (CIME.namelist.Namelist method) get_version() (CIME.XML.generic_xml.GenericXML method) get_workflow_jobs() (CIME.XML.workflow.Workflow method) getdirectory() (CIME.Servers.ftp.FTP method) (CIME.Servers.gftp.GridFTP method) (CIME.Servers.svn.SVN method) (CIME.Servers.wget.WGET method) getfile() (CIME.Servers.ftp.FTP method) (CIME.Servers.generic_server.GenericServer method) (CIME.Servers.gftp.GridFTP method) (CIME.Servers.svn.SVN method) (CIME.Servers.wget.WGET method) git_operation() (CIME.gitinterface.GitInterface method) GitInterface (class in CIME.gitinterface) GLOBAL_TIMEOUT (CIME.tests.base.BaseTestCase attribute) grid (GRID) GridFTP (class in CIME.Servers.gftp) Grids (class in CIME.XML.grids) gunzip_existing_file() (in module CIME.utils) gzip_existing_file() (in module CIME.utils)

H

handle_old_test_data() (in module CIME.jenkins_generic_job) has() (CIME.XML.generic_xml.GenericXML method) has_batch_system() (CIME.XML.machines.Machines method) Headers (class in CIME.XML.headers) hidden_job() (CIME.XML.env_workflow.EnvWorkflow method)

history files hms_to_second() (CIME.date.date static method) HOMME (class in CIME.SystemTests.homme) HommeBase (class in CIME.SystemTests.hommebaseclass) HOMMEBFB (class in CIME.SystemTests.hommebfb) hour() (CIME.date.date method)

I

ICP (class in CIME.SystemTests.icp) id_generator() (in module CIME.utils) import_and_run_sub_or_cmd() (in module CIME.utils) import_from_file() (in module CIME.utils) increment_non_pass_counts() (CIME.test_status.TestStatus method) indent_string() (in module CIME.utils) IndentFormatter (class in CIME.utils) infer_arch_from_tests() (in module CIME.get_tests) init_defaults() (CIME.nmlgen.NamelistGenerator method) initial files initialize_derived_attributes() (CIME.case.case.Case method) input data stream (DIN_LOC_ROOT) Inputdata (class in CIME.XML.inputdata) instance() (CIME.config.ConfigBase class method) invalidate() (CIME.XML.generic_xml.GenericXML class method) IRT (class in CIME.SystemTests.irt)

is_comp_standalone() (in module CIME.utils) is_hist_bless_needed() (in module CIME.bless_test_results) is_last_process_complete() (in module CIME.utils) is_locked() (in module CIME.locked_files) is_namelist_file() (in module CIME.compare_namelists) is_perf_test() (in module CIME.get_tests) is_python_executable() (in module CIME.utils) is_save_timing_dir_project() (CIME.case.case.Case method) is_single_exe_case() (in module CIME.SystemTests.system_tests_common) is_valid_compiler() (CIME.tests.utils.MockMachines method) (CIME.XML.machines.Machines method) is_valid_fortran_name() (in module CIME.namelist) is_valid_fortran_namelist_literal() (in module CIME.namelist) is_valid_MPIlib() (CIME.tests.utils.MockMachines method) (CIME.XML.machines.Machines method) is_valid_value() (CIME.XML.namelist_definition.NamelistDefinition method)

J

jenkins_generic_job() (in module CIME.jenkins_generic_job)

K

key_test_time() (in module CIME.get_tests)

kill_python_subprocesses() (CIME.tests.base.BaseTestCase method) kill_subprocesses() (CIME.tests.base.BaseTestCase method)

L

LDSTA (class in CIME.SystemTests.ldsta) list_available_machines() (CIME.XML.machines.Machines method) list_modules() (CIME.XML.env_mach_specific.EnvMachSpecific method) list_test_data() (in module CIME.scripts.query_testlists) literal_to_python_value() (in module CIME.namelist) live_test_impl() (CIME.tests.test_sys_wait_for_tests.TestWaitForTests method) load() (CIME.config.ConfigBase class method) load_coupler_customization() (in module CIME.baselines.performance)

load_defaults() (CIME.config.Config class method) load_env() (CIME.case.case.Case method) (CIME.tests.case_fake.CaseFake method) (CIME.XML.env_mach_specific.EnvMachSpecific method) loaded (CIME.config.ConfigBase property) lock() (CIME.XML.generic_xml.GenericXML method) lock_file() (in module CIME.locked_files) ls_sorted_by_mtime() (in module CIME.utils)

M

MACHINE (CIME.tests.base.BaseTestCase attribute) Machines (class in CIME.XML.machines) make_all_batch_files() (CIME.XML.env_batch.EnvBatch method) make_batch_script() (CIME.XML.env_batch.EnvBatch method) make_child() (CIME.XML.generic_xml.GenericXML method) make_child_comment() (CIME.XML.generic_xml.GenericXML method) make_env_mach_specific_file() (CIME.XML.env_mach_specific.EnvMachSpecific method) make_fake_teststatus() (in module CIME.tests.utils) make_rundir() (CIME.tests.case_fake.CaseFake method) make_valid_case() (in module CIME.tests.test_unit_case) MakefileTester (class in CIME.tests.utils) mapping mask match_all_lines() (in module CIME.tests.test_unit_utils) match_any() (in module CIME.utils) MCC (class in CIME.SystemTests.mcc) md5() (in module CIME.case.check_input_data) merge_literal_lists() (in module CIME.namelist) merge_nl() (CIME.namelist.Namelist method) method (CIME.tests.test_unit_compare_two.Call attribute) method_calls (CIME.tests.utils.Mocker property) minute() (CIME.date.date method) Mocker (class in CIME.tests.utils) MockMachines (class in CIME.tests.utils) MockTime (class in CIME.tests.test_unit_utils) Model Coupling Toolkit or MCT model_log() (in module CIME.utils) modtime (CIME.XML.generic_xml.GenericXML.CacheEntry attribute) module CIME CIME.aprun CIME.baselines CIME.baselines.performance CIME.bless_test_results CIME.build CIME.build_scripts CIME.buildlib CIME.buildnml CIME.BuildTools CIME.BuildTools.configure CIME.case CIME.case.case CIME.case.case_clone CIME.case.case_cmpgen_namelists CIME.case.case_run CIME.case.case_setup CIME.case.case_st_archive CIME.case.case_submit CIME.case.case_test CIME.case.check_input_data CIME.case.preview_namelists CIME.code_checker CIME.compare_namelists CIME.compare_test_results CIME.config CIME.cs_status CIME.cs_status_creator CIME.data CIME.data.config CIME.data.templates CIME.date CIME.expected_fails CIME.get_tests CIME.get_timing CIME.gitinterface CIME.hist_utils CIME.jenkins_generic_job CIME.locked_files CIME.namelist CIME.nmlgen CIME.provenance CIME.scripts CIME.scripts.create_clone CIME.scripts.create_newcase CIME.scripts.create_test CIME.scripts.query_config CIME.scripts.query_testlists CIME.Servers CIME.Servers.ftp CIME.Servers.generic_server CIME.Servers.gftp CIME.Servers.svn CIME.Servers.wget CIME.simple_compare CIME.status CIME.SystemTests CIME.SystemTests.dae CIME.SystemTests.eri CIME.SystemTests.erio CIME.SystemTests.erp CIME.SystemTests.err CIME.SystemTests.erri CIME.SystemTests.ers CIME.SystemTests.ers2 CIME.SystemTests.ert CIME.SystemTests.funit CIME.SystemTests.homme CIME.SystemTests.hommebaseclass CIME.SystemTests.hommebfb CIME.SystemTests.icp CIME.SystemTests.irt CIME.SystemTests.ldsta CIME.SystemTests.mcc CIME.SystemTests.mvk CIME.SystemTests.nck CIME.SystemTests.ncr CIME.SystemTests.nodefail CIME.SystemTests.pea CIME.SystemTests.pem CIME.SystemTests.pet CIME.SystemTests.pfs CIME.SystemTests.pgn CIME.SystemTests.pre CIME.SystemTests.rep CIME.SystemTests.restart_tests CIME.SystemTests.reuseinitfiles CIME.SystemTests.seq CIME.SystemTests.sms CIME.SystemTests.system_tests_common CIME.SystemTests.system_tests_compare_n CIME.SystemTests.system_tests_compare_two CIME.SystemTests.test_mods CIME.SystemTests.test_utils CIME.SystemTests.test_utils.user_nl_utils CIME.SystemTests.tsc CIME.test_scheduler CIME.test_status CIME.test_utils CIME.tests CIME.tests.base CIME.tests.case_fake CIME.tests.custom_assertions_test_status CIME.tests.scripts_regression_tests CIME.tests.test_sys_bless_tests_results CIME.tests.test_sys_build_system CIME.tests.test_sys_cime_case CIME.tests.test_sys_cime_performance CIME.tests.test_sys_create_newcase CIME.tests.test_sys_full_system CIME.tests.test_sys_grid_generation CIME.tests.test_sys_jenkins_generic_job CIME.tests.test_sys_manage_and_query CIME.tests.test_sys_query_config CIME.tests.test_sys_run_restart CIME.tests.test_sys_save_timings CIME.tests.test_sys_single_submit CIME.tests.test_sys_test_scheduler CIME.tests.test_sys_unittest CIME.tests.test_sys_user_concurrent_mods CIME.tests.test_sys_wait_for_tests CIME.tests.test_unit_aprun CIME.tests.test_unit_baselines_performance CIME.tests.test_unit_bless_test_results CIME.tests.test_unit_case CIME.tests.test_unit_case_fake CIME.tests.test_unit_case_run CIME.tests.test_unit_case_setup CIME.tests.test_unit_compare_test_results CIME.tests.test_unit_compare_two CIME.tests.test_unit_config CIME.tests.test_unit_cs_status CIME.tests.test_unit_custom_assertions_test_status CIME.tests.test_unit_doctest CIME.tests.test_unit_expected_fails_file CIME.tests.test_unit_grids CIME.tests.test_unit_hist_utils CIME.tests.test_unit_locked_files CIME.tests.test_unit_nmlgen CIME.tests.test_unit_paramgen CIME.tests.test_unit_system_tests CIME.tests.test_unit_system_tests_mvk CIME.tests.test_unit_test_status CIME.tests.test_unit_two_link_to_case2_output CIME.tests.test_unit_user_mod_support CIME.tests.test_unit_user_nl_utils CIME.tests.test_unit_utils CIME.tests.test_unit_xml_archive_base CIME.tests.test_unit_xml_env_batch CIME.tests.test_unit_xml_env_mach_specific CIME.tests.test_unit_xml_grids CIME.tests.test_unit_xml_machines CIME.tests.test_unit_xml_namelist_definition CIME.tests.test_unit_xml_tests CIME.tests.utils CIME.Tools CIME.Tools.generate_cylc_workflow CIME.Tools.standard_script_setup CIME.Tools.testreporter CIME.user_mod_support CIME.utils CIME.wait_for_tests CIME.XML CIME.XML.archive CIME.XML.archive_base CIME.XML.batch CIME.XML.component CIME.XML.compsets CIME.XML.entry_id CIME.XML.env_archive CIME.XML.env_base CIME.XML.env_batch CIME.XML.env_build CIME.XML.env_case CIME.XML.env_mach_pes CIME.XML.env_mach_specific CIME.XML.env_run CIME.XML.env_test CIME.XML.env_workflow CIME.XML.expected_fails_file CIME.XML.files CIME.XML.generic_xml CIME.XML.grids CIME.XML.headers CIME.XML.inputdata CIME.XML.machines CIME.XML.namelist_definition CIME.XML.pes CIME.XML.pio CIME.XML.standard_module_setup CIME.XML.stream CIME.XML.test_reporter CIME.XML.testlist CIME.XML.tests CIME.XML.testspec CIME.XML.workflow Tools Tools.generate_cylc_workflow Tools.standard_script_setup Tools.testreporter

month() (CIME.date.date method) MVK (class in CIME.SystemTests.mvk) MVKConfig (class in CIME.SystemTests.mvk)

N

name() (CIME.XML.generic_xml.GenericXML method) Namelist (class in CIME.namelist) namelist files NamelistDefinition (class in CIME.XML.namelist_definition) NamelistGenerator (class in CIME.nmlgen) NCK (class in CIME.SystemTests.nck) NCR (class in CIME.SystemTests.ncr) new_hash() (CIME.case.case.Case method)

new_instance() (CIME.nmlgen.NamelistGenerator method) new_lid() (in module CIME.utils) NO_BATCH (CIME.tests.base.BaseTestCase attribute) NO_CMAKE (CIME.tests.base.BaseTestCase attribute) NO_FORTRAN_RUN (CIME.tests.base.BaseTestCase attribute) NO_TEARDOWN (CIME.tests.base.BaseTestCase attribute) NODEFAIL (class in CIME.SystemTests.nodefail) normalize_case_id() (in module CIME.utils)

O

output_line() (CIME.tests.test_unit_custom_assertions_test_status.TestCustomAssertions static method)

overwrite_existing_entries() (CIME.XML.entry_id.EntryID method)

P

parse() (in module CIME.namelist) parse_args_and_handle_standard_logging_options() (in module CIME.utils) parse_command_line() (in module CIME.scripts.create_clone) (in module CIME.scripts.create_newcase) (in module CIME.scripts.create_test) (in module CIME.scripts.query_config) (in module CIME.scripts.query_testlists) (in module CIME.Tools.generate_cylc_workflow) (in module CIME.Tools.testreporter) (in module Tools.generate_cylc_workflow) (in module Tools.testreporter) parse_input() (in module CIME.buildlib) (in module CIME.buildnml) parse_test_name() (in module CIME.utils) parse_test_status() (in module CIME.tests.utils) patch() (CIME.tests.utils.Mocker method) PEA (class in CIME.SystemTests.pea) PEM (class in CIME.SystemTests.pem) perf_check_for_memory_leak() (in module CIME.SystemTests.system_tests_common) perf_compare_memory_baseline() (in module CIME.baselines.performance) perf_compare_throughput_baseline() (in module CIME.baselines.performance) perf_get_memory() (in module CIME.baselines.performance) perf_get_memory_list() (in module CIME.baselines.performance) perf_get_throughput() (in module CIME.baselines.performance) perf_write_baseline() (in module CIME.baselines.performance) Pes (class in CIME.XML.pes)

PET (class in CIME.SystemTests.pet) PFS (class in CIME.SystemTests.pfs) PGN (class in CIME.SystemTests.pgn) phase_statuses_dump() (CIME.test_status.TestStatus method) PIO (class in CIME.XML.pio) pop() (CIME.XML.generic_xml.GenericXML method) populate() (CIME.XML.env_mach_specific.EnvMachSpecific method) post_build() (in module CIME.build) PRE (class in CIME.SystemTests.pre) preview_run() (CIME.case.case.Case method) print_compset() (in module CIME.scripts.query_config) print_machine_values() (in module CIME.scripts.query_config) print_method_rst() (CIME.config.ConfigBase method) print_rst_header() (in module CIME.config) print_rst_table() (CIME.config.ConfigBase method) (in module CIME.config) print_test_data() (in module CIME.scripts.query_testlists) print_values() (CIME.XML.component.Component method) (CIME.XML.compsets.Compsets method) (CIME.XML.grids.Grids method) (CIME.XML.machines.Machines method) (CIME.XML.tests.Tests method) print_variable_rst() (CIME.config.ConfigBase method) probe_machine_name() (CIME.XML.machines.Machines method) process_evv_output() (CIME.SystemTests.mvk.MVK method) proxy (CIME.XML.namelist_definition.CaseInsensitiveDict attribute) push2testdb() (CIME.XML.test_reporter.TestReporter method)

Q

query_component_settings() (in module CIME.scripts.query_config) query_compsets() (in module CIME.scripts.query_config) query_grids() (in module CIME.scripts.query_config) query_machines() (in module CIME.scripts.query_config)

query_var() (CIME.tests.utils.CMakeTester method) (CIME.tests.utils.MakefileTester method) queue_meets_spec() (CIME.XML.env_batch.EnvBatch method) quote_string() (CIME.nmlgen.NamelistGenerator static method)

R

read() (CIME.XML.generic_xml.GenericXML method) read_baseline_file() (in module CIME.baselines.performance) read_fd() (CIME.XML.generic_xml.GenericXML method) read_xml() (CIME.case.case.Case method) record_cmd() (CIME.case.case.Case method) redirect_logger() (in module CIME.utils) redirect_stderr() (in module CIME.utils) redirect_stdout() (in module CIME.utils) redirect_stdout_stderr() (in module CIME.utils) regression test remove_child() (CIME.XML.generic_xml.GenericXML method) rename_all_hist_files() (in module CIME.hist_utils) rename_group() (CIME.nmlgen.NamelistGenerator method) (CIME.XML.namelist_definition.NamelistDefinition method) REP (class in CIME.SystemTests.rep) report_job_status() (CIME.case.case.Case method) reset_cime_config() (in module CIME.utils) resolution resolve_mail_type_args() (in module CIME.utils) restart files RestartTest (class in CIME.SystemTests.restart_tests) restore_from_archive() (CIME.case.case.Case method) (in module CIME.case.case_st_archive) ret (CIME.tests.utils.Mocker property) return_values() (CIME.XML.component.Component method) (CIME.XML.machines.Machines method) REUSEINITFILES (class in CIME.SystemTests.reuseinitfiles) revert_mocks() (CIME.tests.utils.Mocker method) root (CIME.XML.generic_xml.GenericXML.CacheEntry attribute) rpointer files run directory (RUNDIR) run() (CIME.SystemTests.system_tests_common.SystemTestsCommon method) run_and_log_case_status() (in module CIME.status)

run_bld_cmd_ensure_logging() (in module CIME.utils) run_cmd() (in module CIME.utils) run_cmd_assert_result() (CIME.tests.base.BaseTestCase method) run_cmd_no_fail() (in module CIME.utils) run_gmake() (in module CIME.buildlib) run_indv() (CIME.SystemTests.system_tests_common.FakeTest method) (CIME.SystemTests.system_tests_common.SystemTestsCommon method) (CIME.SystemTests.system_tests_common.TESTRUNFAILRESET method) (CIME.tests.test_unit_compare_two.SystemTestsCompareTwoFake method) run_phase() (CIME.SystemTests.dae.DAE method) (CIME.SystemTests.eri.ERI method) (CIME.SystemTests.erio.ERIO method) (CIME.SystemTests.ers.ERS method) (CIME.SystemTests.ers2.ERS2 method) (CIME.SystemTests.ert.ERT method) (CIME.SystemTests.funit.FUNIT method) (CIME.SystemTests.hommebaseclass.HommeBase method) (CIME.SystemTests.icp.ICP method) (CIME.SystemTests.ldsta.LDSTA method) (CIME.SystemTests.nodefail.NODEFAIL method) (CIME.SystemTests.pfs.PFS method) (CIME.SystemTests.pgn.PGN method) (CIME.SystemTests.pre.PRE method) (CIME.SystemTests.system_tests_common.SystemTestsCommon method) (CIME.SystemTests.system_tests_common.TESTRUNFAILEXC method) (CIME.SystemTests.system_tests_common.TESTRUNUSERXMLCHANGE method) (CIME.SystemTests.system_tests_common.TESTTESTDIFF method) (CIME.SystemTests.system_tests_compare_n.SystemTestsCompareN method) (CIME.SystemTests.system_tests_compare_two.SystemTestsCompareTwo method) (CIME.SystemTests.tsc.TSC method) run_phase_get_clone_name() (CIME.XML.env_test.EnvTest method) run_sub_or_cmd() (in module CIME.utils) run_tests() (CIME.test_scheduler.TestScheduler method)

S

safe_copy() (in module CIME.utils) safe_recursive_copy() (in module CIME.utils) sandbox (SRCROOT) save_all_env_info() (CIME.XML.env_mach_specific.EnvMachSpecific method) save_test_success() (in module CIME.provenance) save_test_time() (in module CIME.provenance) scan_child() (CIME.XML.generic_xml.GenericXML method) scan_children() (CIME.XML.env_base.EnvBase method) (CIME.XML.generic_xml.GenericXML method) scan_for_test_ids() (in module CIME.jenkins_generic_job) scan_optional_child() (CIME.XML.generic_xml.GenericXML method) SCRIPT_DIR (CIME.tests.base.BaseTestCase attribute) second() (CIME.date.date method) second_of_day() (CIME.date.date method) second_to_hms() (CIME.date.date static method) select_best_queue() (CIME.XML.env_batch.EnvBatch method) SEQ (class in CIME.SystemTests.seq) set() (CIME.XML.generic_xml.GenericXML method) set_abs_file_path() (CIME.nmlgen.NamelistGenerator method) set_batch_system() (CIME.XML.batch.Batch method) (CIME.XML.env_batch.EnvBatch method) set_batch_system_type() (CIME.XML.env_batch.EnvBatch method) set_comp_classes() (CIME.case.case.Case method) set_components() (CIME.XML.env_base.EnvBase method) set_default_value() (CIME.XML.entry_id.EntryID method) set_element_text() (CIME.XML.generic_xml.GenericXML method) set_exeroot() (CIME.tests.case_fake.CaseFake method) set_file() (CIME.case.case.Case method) set_header() (CIME.XML.testspec.TestSpec method) set_initial_test_values() (CIME.case.case.Case method) (CIME.tests.case_fake.CaseFake method) set_initial_values() (CIME.XML.env_test.EnvTest method) set_job_defaults() (CIME.XML.env_batch.EnvBatch method) set_last_core_phase_to_fail() (CIME.tests.test_unit_cs_status.TestCsStatus method) set_logger_indent() (in module CIME.utils) set_lookup_value() (CIME.case.case.Case method) set_machine() (CIME.XML.machines.Machines method) set_model() (in module CIME.utils) set_model_version() (CIME.case.case.Case method) set_name() (CIME.XML.generic_xml.GenericXML method) set_node_values() (CIME.XML.namelist_definition.NamelistDefinition method) set_nodes() (CIME.XML.namelist_definition.NamelistDefinition method) set_phase_to_status() (CIME.tests.test_unit_cs_status.TestCsStatus static method) set_rundir() (CIME.tests.case_fake.CaseFake method) set_status() (CIME.test_status.TestStatus method) set_test_parameter() (CIME.XML.env_test.EnvTest method) set_text() (CIME.XML.generic_xml.GenericXML method) set_up_signal_handlers() (in module CIME.wait_for_tests) set_valid_values() (CIME.case.case.Case method) (CIME.XML.entry_id.EntryID method) set_value() (CIME.BuildTools.configure.FakeCase method) (CIME.case.case.Case method) (CIME.nmlgen.NamelistGenerator method) (CIME.tests.case_fake.CaseFake method) (CIME.XML.entry_id.EntryID method) (CIME.XML.env_base.EnvBase method) (CIME.XML.env_batch.EnvBatch method) (CIME.XML.env_build.EnvBuild method) (CIME.XML.env_mach_pes.EnvMachPes method) (CIME.XML.env_run.EnvRun method) (CIME.XML.env_test.EnvTest method) (CIME.XML.env_workflow.EnvWorkflow method) (CIME.XML.files.Files method) (CIME.XML.generic_xml.GenericXML method) (CIME.XML.machines.Machines method) (CIME.XML.namelist_definition.NamelistDefinition method)

set_variable_value() (CIME.namelist.Namelist method) setUp() (CIME.tests.base.BaseTestCase method) (CIME.tests.test_sys_bless_tests_results.TestBlessTestResults method) (CIME.tests.test_sys_jenkins_generic_job.TestJenkinsGenericJob method) (CIME.tests.test_sys_manage_and_query.TestManageAndQuery method) (CIME.tests.test_sys_query_config.TestQueryConfig method) (CIME.tests.test_sys_unittest.TestUnitTest method) (CIME.tests.test_sys_wait_for_tests.TestWaitForTests method) (CIME.tests.test_unit_case.TestCase method) (CIME.tests.test_unit_case.TestCase_RecordCmd method) (CIME.tests.test_unit_case_fake.TestCaseFake method) (CIME.tests.test_unit_compare_test_results.TestCaseFake method) (CIME.tests.test_unit_compare_two.TestSystemTestsCompareTwo method) (CIME.tests.test_unit_cs_status.TestCsStatus method) (CIME.tests.test_unit_expected_fails_file.TestExpectedFailsFile method) (CIME.tests.test_unit_grids.TestGrids method) (CIME.tests.test_unit_test_status.TestTestStatus method) (CIME.tests.test_unit_two_link_to_case2_output.TestLinkToCase2Output method) (CIME.tests.test_unit_user_mod_support.TestUserModSupport method) (CIME.tests.test_unit_user_nl_utils.TestUserNLCopier method) (CIME.tests.test_unit_utils.TestFileContainsPythonFunction method) (CIME.tests.test_unit_utils.TestUtils method) (CIME.tests.test_unit_xml_machines.TestUnitXMLMachines method) (CIME.tests.test_unit_xml_tests.TestXMLTests method) setup() (CIME.XML.archive.Archive method) setup_arguments() (in module CIME.tests.scripts_regression_tests) setup_header() (CIME.XML.test_reporter.TestReporter method) setup_proxy() (CIME.tests.base.BaseTestCase method) setup_standard_logging_options() (in module CIME.utils) setup_test_and_directories() (CIME.tests.test_unit_two_link_to_case2_output.TestLinkToCase2Output method) setUpClass() (CIME.tests.test_sys_create_newcase.TestCreateNewcase class method) (CIME.tests.test_sys_grid_generation.TestGridGeneration class method) (CIME.tests.test_sys_unittest.TestUnitTest class method) SharedArea (class in CIME.utils) shouldRaise() (in module CIME.namelist) signal_handler() (in module CIME.wait_for_tests) simple_test() (CIME.tests.test_sys_jenkins_generic_job.TestJenkinsGenericJob method) (CIME.tests.test_sys_save_timings.TestSaveTimings method) (CIME.tests.test_sys_wait_for_tests.TestWaitForTests method) single_submit_impl() (in module CIME.scripts.create_test) SMS (class in CIME.SystemTests.sms) source modifications (CASEROOT/SourceMods) split_type_string() (CIME.XML.namelist_definition.NamelistDefinition method) spy() (in module CIME.tests.test_unit_config) stage_refcase() (CIME.case.case.Case method) (in module CIME.case.check_input_data) start_buffering_output() (in module CIME.utils) stop_buffering_output() (in module CIME.utils) Stream (class in CIME.XML.stream) string_in_list() (in module CIME.utils) string_to_character_literal() (in module CIME.namelist) stringify_bool() (in module CIME.utils) stub component submit() (CIME.case.case.Case method) (in module CIME.case.case_submit) submit_jobs() (CIME.case.case.Case method) (CIME.XML.env_batch.EnvBatch method) suite_has_test() (in module CIME.get_tests) support_single_exe() (CIME.XML.tests.Tests method) SVN (class in CIME.Servers.svn) symlink_force() (in module CIME.utils) SystemTestsCommon (class in CIME.SystemTests.system_tests_common) SystemTestsCompareN (class in CIME.SystemTests.system_tests_compare_n) SystemTestsCompareTwo (class in CIME.SystemTests.system_tests_compare_two) SystemTestsCompareTwoFake (class in CIME.tests.test_unit_compare_two) (class in CIME.tests.test_unit_two_link_to_case2_output)

T

tag tearDown() (CIME.tests.base.BaseTestCase method) (CIME.tests.test_sys_bless_tests_results.TestBlessTestResults method) (CIME.tests.test_sys_create_newcase.TestCreateNewcase method) (CIME.tests.test_sys_jenkins_generic_job.TestJenkinsGenericJob method) (CIME.tests.test_sys_wait_for_tests.TestWaitForTests method) (CIME.tests.test_unit_case_fake.TestCaseFake method) (CIME.tests.test_unit_compare_test_results.TestCaseFake method) (CIME.tests.test_unit_compare_two.TestSystemTestsCompareTwo method) (CIME.tests.test_unit_cs_status.TestCsStatus method) (CIME.tests.test_unit_expected_fails_file.TestExpectedFailsFile method) (CIME.tests.test_unit_grids.TestGrids method) (CIME.tests.test_unit_system_tests_mvk.TestSystemTestsMVK method) (CIME.tests.test_unit_two_link_to_case2_output.TestLinkToCase2Output method) (CIME.tests.test_unit_user_mod_support.TestUserModSupport method) (CIME.tests.test_unit_user_nl_utils.TestUserNLCopier method) (CIME.tests.test_unit_utils.TestFileContainsPythonFunction method) tearDownClass() (CIME.tests.test_sys_create_newcase.TestCreateNewcase class method) (CIME.tests.test_sys_grid_generation.TestGridGeneration class method) (CIME.tests.test_sys_unittest.TestUnitTest class method) TemporaryDirectory (class in CIME.tests.utils) test__compare_baseline() (CIME.tests.test_unit_system_tests_mvk.TestSystemTestsMVK method) test__compare_baseline_resubmit() (CIME.tests.test_unit_system_tests_mvk.TestSystemTestsMVK method) test__generate_baseline() (CIME.tests.test_unit_system_tests_mvk.TestSystemTestsMVK method) test__perf_get_memory() (CIME.tests.test_unit_baselines_performance.TestUnitBaselinesPerformance method) test__perf_get_memory_override() (CIME.tests.test_unit_baselines_performance.TestUnitBaselinesPerformance method) test__perf_get_throughput() (CIME.tests.test_unit_baselines_performance.TestUnitBaselinesPerformance method) test__submit() (CIME.tests.test_unit_case.TestCaseSubmit method) test_a_createnewcase() (CIME.tests.test_sys_create_newcase.TestCreateNewcase method) test_a_phases() (CIME.tests.test_sys_test_scheduler.TestTestScheduler method) test_a_unit_test() (CIME.tests.test_sys_unittest.TestUnitTest method) test_aa_no_flush_on_instantiate() (CIME.tests.test_sys_create_newcase.TestCreateNewcase method) test_add_grid_info_existing() (CIME.tests.test_unit_grids.TestGridsFunctions method) test_add_grid_info_existing_with_value_for_multiple() (CIME.tests.test_unit_grids.TestGridsFunctions method) test_add_grid_info_initial() (CIME.tests.test_unit_grids.TestGridsFunctions method) test_append() (CIME.tests.test_unit_user_nl_utils.TestUserNLCopier method) test_append_list() (CIME.tests.test_unit_user_nl_utils.TestUserNLCopier method) test_append_multiple_files() (CIME.tests.test_unit_user_nl_utils.TestUserNLCopier method) test_append_without_files_raises_exception() (CIME.tests.test_unit_user_nl_utils.TestUserNLCopier method) test_aprun() (CIME.tests.test_unit_aprun.TestUnitAprun method) test_aprun_extra_args() (CIME.tests.test_unit_aprun.TestUnitAprun method) test_aprun_get_args() (CIME.tests.test_unit_xml_env_mach_specific.TestXMLEnvMachSpecific method) test_assertCorePhases_missingPhase_fails() (CIME.tests.test_unit_custom_assertions_test_status.TestCustomAssertions method) test_assertCorePhases_passes() (CIME.tests.test_unit_custom_assertions_test_status.TestCustomAssertions method) test_assertCorePhases_wrongName_fails() (CIME.tests.test_unit_custom_assertions_test_status.TestCustomAssertions method) test_assertCorePhases_wrongStatus_fails() (CIME.tests.test_unit_custom_assertions_test_status.TestCustomAssertions method) test_assertPhaseAbsent_fails() (CIME.tests.test_unit_custom_assertions_test_status.TestCustomAssertions method) test_assertPhaseAbsent_passes() (CIME.tests.test_unit_custom_assertions_test_status.TestCustomAssertions method) test_assertStatusOfPhase_withExtra_passes() (CIME.tests.test_unit_custom_assertions_test_status.TestCustomAssertions method) test_assertStatusOfPhase_xfailExpected_fails() (CIME.tests.test_unit_custom_assertions_test_status.TestCustomAssertions method) test_assertStatusOfPhase_xfailExpected_passes() (CIME.tests.test_unit_custom_assertions_test_status.TestCustomAssertions method) test_assertStatusOfPhase_xfailNo_fails() (CIME.tests.test_unit_custom_assertions_test_status.TestCustomAssertions method) test_assertStatusOfPhase_xfailNo_passes() (CIME.tests.test_unit_custom_assertions_test_status.TestCustomAssertions method) test_assertStatusOfPhase_xfailUnexpected_fails() (CIME.tests.test_unit_custom_assertions_test_status.TestCustomAssertions method) test_assertStatusOfPhase_xfailUnexpected_passes() (CIME.tests.test_unit_custom_assertions_test_status.TestCustomAssertions method) test_b_cime_f90_unit_tests() (CIME.tests.test_sys_unittest.TestUnitTest method) test_b_full() (CIME.tests.test_sys_test_scheduler.TestTestScheduler method) test_b_user_mods() (CIME.tests.test_sys_create_newcase.TestCreateNewcase method) test_baseline() (CIME.tests.test_unit_compare_test_results.TestCaseFake method) test_baseline_name_none() (CIME.tests.test_unit_bless_test_results.TestUnitBlessTestResults method) test_baseline_root_none() (CIME.tests.test_unit_bless_test_results.TestUnitBlessTestResults method) test_basic() (CIME.tests.test_unit_expected_fails_file.TestExpectedFailsFile method) (CIME.tests.test_unit_two_link_to_case2_output.TestLinkToCase2Output method) (CIME.tests.test_unit_user_mod_support.TestUserModSupport method) test_bless_all() (CIME.tests.test_unit_bless_test_results.TestUnitBlessTestResults method) test_bless_hist_only() (CIME.tests.test_unit_bless_test_results.TestUnitBlessTestResults method) test_bless_history() (CIME.tests.test_unit_bless_test_results.TestUnitBlessTestResults method) test_bless_history_fail() (CIME.tests.test_unit_bless_test_results.TestUnitBlessTestResults method) test_bless_history_force() (CIME.tests.test_unit_bless_test_results.TestUnitBlessTestResults method) test_bless_memory() (CIME.tests.test_unit_bless_test_results.TestUnitBlessTestResults method) test_bless_memory_file_not_found_error() (CIME.tests.test_unit_bless_test_results.TestUnitBlessTestResults method) test_bless_memory_force() (CIME.tests.test_unit_bless_test_results.TestUnitBlessTestResults method) test_bless_memory_force_error() (CIME.tests.test_unit_bless_test_results.TestUnitBlessTestResults method) test_bless_memory_general_error() (CIME.tests.test_unit_bless_test_results.TestUnitBlessTestResults method) test_bless_memory_only() (CIME.tests.test_unit_bless_test_results.TestUnitBlessTestResults method) test_bless_memory_report_only() (CIME.tests.test_unit_bless_test_results.TestUnitBlessTestResults method) test_bless_namelists_fail() (CIME.tests.test_unit_bless_test_results.TestUnitBlessTestResults method) test_bless_namelists_force() (CIME.tests.test_unit_bless_test_results.TestUnitBlessTestResults method) test_bless_namelists_new_test_id() (CIME.tests.test_unit_bless_test_results.TestUnitBlessTestResults method) test_bless_namelists_new_test_root() (CIME.tests.test_unit_bless_test_results.TestUnitBlessTestResults method) test_bless_namelists_only() (CIME.tests.test_unit_bless_test_results.TestUnitBlessTestResults method) test_bless_namelists_pes_file() (CIME.tests.test_unit_bless_test_results.TestUnitBlessTestResults method) test_bless_namelists_report_only() (CIME.tests.test_unit_bless_test_results.TestUnitBlessTestResults method) test_bless_perf() (CIME.tests.test_unit_bless_test_results.TestUnitBlessTestResults method) test_bless_test_results() (CIME.tests.test_sys_bless_tests_results.TestBlessTestResults method) test_bless_tests_no_match() (CIME.tests.test_unit_bless_test_results.TestUnitBlessTestResults method) test_bless_tests_results_fail() (CIME.tests.test_unit_bless_test_results.TestUnitBlessTestResults method) test_bless_tests_results_homme() (CIME.tests.test_unit_bless_test_results.TestUnitBlessTestResults method) test_bless_throughput() (CIME.tests.test_unit_bless_test_results.TestUnitBlessTestResults method) test_bless_throughput_file_not_found_error() (CIME.tests.test_unit_bless_test_results.TestUnitBlessTestResults method) test_bless_throughput_force() (CIME.tests.test_unit_bless_test_results.TestUnitBlessTestResults method) test_bless_throughput_force_error() (CIME.tests.test_unit_bless_test_results.TestUnitBlessTestResults method) test_bless_throughput_general_error() (CIME.tests.test_unit_bless_test_results.TestUnitBlessTestResults method) test_bless_throughput_only() (CIME.tests.test_unit_bless_test_results.TestUnitBlessTestResults method) test_bless_throughput_report_only() (CIME.tests.test_unit_bless_test_results.TestUnitBlessTestResults method) test_build_phase() (CIME.tests.test_unit_system_tests_mvk.TestSystemTestsMVK method) test_c_create_clone_keepexe() (CIME.tests.test_sys_create_newcase.TestCreateNewcase method) test_c_use_existing() (CIME.tests.test_sys_test_scheduler.TestTestScheduler method) test_case_clean() (CIME.tests.test_sys_cime_case.TestCimeCase method) test_case_submit_interface() (CIME.tests.test_sys_cime_case.TestCimeCase method) test_check_case() (CIME.tests.test_unit_case.TestCaseSubmit method) test_check_diff_env_batch() (CIME.tests.test_unit_locked_files.TestLockedFiles method) test_check_diff_env_build() (CIME.tests.test_unit_locked_files.TestLockedFiles method) test_check_diff_env_build_no_diff() (CIME.tests.test_unit_locked_files.TestLockedFiles method) test_check_diff_env_build_pio_version() (CIME.tests.test_unit_locked_files.TestLockedFiles method) test_check_diff_env_case() (CIME.tests.test_unit_locked_files.TestLockedFiles method) test_check_diff_env_mach_pes() (CIME.tests.test_unit_locked_files.TestLockedFiles method) test_check_diff_reset_and_rebuild() (CIME.tests.test_unit_locked_files.TestLockedFiles method) test_check_diff_reset_and_rebuild_single() (CIME.tests.test_unit_locked_files.TestLockedFiles method) test_check_for_memleak() (CIME.tests.test_unit_system_tests.TestUnitSystemTests method) test_check_for_memleak_found() (CIME.tests.test_unit_system_tests.TestUnitSystemTests method) test_check_for_memleak_not_enough_samples() (CIME.tests.test_unit_system_tests.TestUnitSystemTests method) test_check_for_memleak_runtime_error() (CIME.tests.test_unit_system_tests.TestUnitSystemTests method) test_check_lockedfile() (CIME.tests.test_unit_locked_files.TestLockedFiles method) test_check_lockedfiles() (CIME.tests.test_unit_locked_files.TestLockedFiles method) test_check_lockedfiles_quiet() (CIME.tests.test_unit_locked_files.TestLockedFiles method) test_check_lockedfiles_skip() (CIME.tests.test_unit_locked_files.TestLockedFiles method) test_check_num_elements_right_ndomains() (CIME.tests.test_unit_grids.TestComponentGrids method) test_check_num_elements_right_nmaps() (CIME.tests.test_unit_grids.TestComponentGrids method) test_check_num_elements_wrong_ndomains() (CIME.tests.test_unit_grids.TestComponentGrids method) test_check_num_elements_wrong_nmaps() (CIME.tests.test_unit_grids.TestComponentGrids method) test_chksum() (CIME.tests.test_sys_test_scheduler.TestTestScheduler method) test_cime_case() (CIME.tests.test_sys_cime_case.TestCimeCase method) test_cime_case_allow_failed_prereq() (CIME.tests.test_sys_cime_case.TestCimeCase method) test_cime_case_build_threaded_1() (CIME.tests.test_sys_cime_case.TestCimeCase method) test_cime_case_build_threaded_2() (CIME.tests.test_sys_cime_case.TestCimeCase method) test_cime_case_ctrl_performance() (CIME.tests.test_sys_cime_performance.TestCimePerformance method) test_cime_case_force_pecount() (CIME.tests.test_sys_cime_case.TestCimeCase method) test_cime_case_mpi_serial() (CIME.tests.test_sys_cime_case.TestCimeCase method) test_cime_case_prereq() (CIME.tests.test_sys_cime_case.TestCimeCase method) test_cime_case_resubmit_immediate() (CIME.tests.test_sys_cime_case.TestCimeCase method) test_cime_case_st_archive_resubmit() (CIME.tests.test_sys_cime_case.TestCimeCase method) test_cime_case_test_custom_project() (CIME.tests.test_sys_cime_case.TestCimeCase method) test_cime_case_test_walltime_mgmt_1() (CIME.tests.test_sys_cime_case.TestCimeCase method) test_cime_case_test_walltime_mgmt_2() (CIME.tests.test_sys_cime_case.TestCimeCase method) test_cime_case_test_walltime_mgmt_3() (CIME.tests.test_sys_cime_case.TestCimeCase method) test_cime_case_test_walltime_mgmt_4() (CIME.tests.test_sys_cime_case.TestCimeCase method) test_cime_case_test_walltime_mgmt_5() (CIME.tests.test_sys_cime_case.TestCimeCase method) test_cime_case_test_walltime_mgmt_6() (CIME.tests.test_sys_cime_case.TestCimeCase method) test_cime_case_test_walltime_mgmt_7() (CIME.tests.test_sys_cime_case.TestCimeCase method) test_cime_case_test_walltime_mgmt_8() (CIME.tests.test_sys_cime_case.TestCimeCase method) test_cime_case_xmlchange_append() (CIME.tests.test_sys_cime_case.TestCimeCase method) test_class() (CIME.tests.test_unit_config.TestConfig method) test_class_external() (CIME.tests.test_unit_config.TestConfig method) test_clean_rebuild() (CIME.tests.test_sys_build_system.TestBuildSystem method) test_cmd_arg() (CIME.tests.test_unit_case.TestCase_RecordCmd method) test_cmd_path() (CIME.tests.test_unit_xml_env_mach_specific.TestXMLEnvMachSpecific method) test_compare_baseline() (CIME.tests.test_unit_system_tests_mvk.TestSystemTestsMVK method) test_compare_fails() (CIME.tests.test_unit_compare_two.TestSystemTestsCompareTwo method) test_compare_memory() (CIME.tests.test_unit_system_tests.TestUnitSystemTests method) test_compare_memory_erorr_diff() (CIME.tests.test_unit_system_tests.TestUnitSystemTests method) test_compare_memory_erorr_fail() (CIME.tests.test_unit_system_tests.TestUnitSystemTests method) test_compare_passes() (CIME.tests.test_unit_compare_two.TestSystemTestsCompareTwo method) test_compare_throughput() (CIME.tests.test_unit_system_tests.TestUnitSystemTests method) test_compare_throughput_error_diff() (CIME.tests.test_unit_system_tests.TestUnitSystemTests method) test_compare_throughput_fail() (CIME.tests.test_unit_system_tests.TestUnitSystemTests method) TEST_COMPILER (CIME.tests.base.BaseTestCase attribute) test_configure() (CIME.tests.test_sys_cime_case.TestCimeCase method) test_contains_correct_def_and_others() (CIME.tests.test_unit_utils.TestFileContainsPythonFunction method) test_copy() (CIME.tests.test_unit_case.TestCase method) test_copy_globs() (CIME.tests.test_unit_utils.TestUtils method) test_copy_histfiles() (CIME.tests.test_unit_hist_utils.TestHistUtils method) test_copy_histfiles_exclude() (CIME.tests.test_unit_hist_utils.TestHistUtils method) test_count_fails() (CIME.tests.test_unit_cs_status.TestCsStatus method) test_create() (CIME.tests.test_unit_case.TestCase method) test_create_clone() (CIME.tests.test_unit_case_fake.TestCaseFake method) test_create_macros() (CIME.tests.test_unit_case_setup.TestCaseSetup method) test_create_macros_cmake() (CIME.tests.test_unit_case_setup.TestCaseSetup method) test_create_macros_copy_extra() (CIME.tests.test_unit_case_setup.TestCaseSetup method) test_create_macros_copy_user() (CIME.tests.test_unit_case_setup.TestCaseSetup method) test_create_test_longname() (CIME.tests.test_sys_cime_case.TestCimeCase method) test_current_is() (CIME.tests.test_unit_test_status.TestTestStatus method) test_d_create_clone_new_user() (CIME.tests.test_sys_create_newcase.TestCreateNewcase method) test_d_retry() (CIME.tests.test_sys_test_scheduler.TestTestScheduler method) test_dd_create_clone_not_writable() (CIME.tests.test_sys_create_newcase.TestCreateNewcase method) test_def_barfoo() (CIME.tests.test_unit_utils.TestLineDefinesPythonFunction method) test_def_foo() (CIME.tests.test_unit_utils.TestLineDefinesPythonFunction method) test_def_foo_indented() (CIME.tests.test_unit_utils.TestLineDefinesPythonFunction method) test_def_foo_no_parens() (CIME.tests.test_unit_utils.TestLineDefinesPythonFunction method) test_def_foo_space() (CIME.tests.test_unit_utils.TestLineDefinesPythonFunction method) test_def_foobar() (CIME.tests.test_unit_utils.TestLineDefinesPythonFunction method) test_default_var() (CIME.tests.test_unit_paramgen.TestParamGenXmlConstructor method) test_diff_lockedfile() (CIME.tests.test_unit_locked_files.TestLockedFiles method) test_diff_lockedfile_detect_difference() (CIME.tests.test_unit_locked_files.TestLockedFiles method) test_diff_lockedfile_does_not_exist() (CIME.tests.test_unit_locked_files.TestLockedFiles method) test_diff_lockedfile_not_supported() (CIME.tests.test_unit_locked_files.TestLockedFiles method) test_does_not_contain_correct_def() (CIME.tests.test_unit_utils.TestFileContainsPythonFunction method) test_dry_run() (CIME.tests.test_unit_system_tests.TestUnitSystemTests method) test_duplicate_entry_error() (CIME.tests.test_unit_paramgen.TestParamGenXmlConstructor method) test_duplicate_includes() (CIME.tests.test_unit_user_mod_support.TestUserModSupport method) test_e_test_inferred_compiler() (CIME.tests.test_sys_test_scheduler.TestTestScheduler method) test_e_xmlquery() (CIME.tests.test_sys_create_newcase.TestCreateNewcase method) test_env_archive() (CIME.case.case.Case method) (in module CIME.case.case_st_archive) test_env_loading() (CIME.tests.test_sys_cime_case.TestCimeCase method) test_error() (CIME.tests.test_unit_case.TestCase_RecordCmd method) test_exclude() (CIME.tests.test_unit_bless_test_results.TestUnitBlessTestResults method) test_exclude_testing() (CIME.tests.test_unit_xml_archive_base.TestXMLArchiveBase method) test_existing_link() (CIME.tests.test_unit_two_link_to_case2_output.TestLinkToCase2Output method) test_expandable_vars() (CIME.tests.test_unit_paramgen.TestParamGen method) test_expected_fails() (CIME.tests.test_unit_cs_status.TestCsStatus method) test_extension_included() (CIME.tests.test_unit_xml_archive_base.TestXMLArchiveBase method) test_f_createnewcase_with_user_compset() (CIME.tests.test_sys_create_newcase.TestCreateNewcase method) test_failed_early() (CIME.tests.test_unit_compare_test_results.TestCaseFake method) test_fails_only() (CIME.tests.test_unit_cs_status.TestCsStatus method) test_find_best_mpirun_match() (CIME.tests.test_unit_xml_env_mach_specific.TestXMLEnvMachSpecific method) test_fix_sys_argv_quotes() (CIME.tests.test_unit_case.TestCase method) test_fix_sys_argv_quotes_incomplete() (CIME.tests.test_unit_case.TestCase method) test_fix_sys_argv_quotes_kv() (CIME.tests.test_unit_case.TestCase method) test_fix_sys_argv_quotes_val() (CIME.tests.test_unit_case.TestCase method) test_fix_sys_argv_quotes_val_quoted() (CIME.tests.test_unit_case.TestCase method) test_force_rebuild() (CIME.tests.test_sys_test_scheduler.TestTestScheduler method) (CIME.tests.test_unit_cs_status.TestCsStatus method) test_formula_expansion() (CIME.tests.test_unit_paramgen.TestParamGen method) test_full_system() (CIME.tests.test_sys_full_system.TestFullSystem method) test_g_createnewcase_with_user_compset_and_env_mach_pes() (CIME.tests.test_sys_create_newcase.TestCreateNewcase method) test_gen_domain() (CIME.tests.test_sys_grid_generation.TestGridGeneration method) test_generate_baseline() (CIME.tests.test_unit_system_tests.TestUnitSystemTests method) test_generate_namelist() (CIME.tests.test_unit_system_tests_mvk.TestSystemTestsMVK method) test_generate_namelist_multiple_components() (CIME.tests.test_unit_system_tests_mvk.TestSystemTestsMVK method) test_get_aprun_mode_default() (CIME.tests.test_unit_xml_env_mach_specific.TestXMLEnvMachSpecific method) test_get_aprun_mode_not_valid() (CIME.tests.test_unit_xml_env_mach_specific.TestXMLEnvMachSpecific method) test_get_aprun_mode_user_defined() (CIME.tests.test_unit_xml_env_mach_specific.TestXMLEnvMachSpecific method) test_get_cpl_mem_usage() (CIME.tests.test_unit_baselines_performance.TestUnitBaselinesPerformance method) test_get_cpl_mem_usage_gz() (CIME.tests.test_unit_baselines_performance.TestUnitBaselinesPerformance method) test_get_cpl_throughput() (CIME.tests.test_unit_baselines_performance.TestUnitBaselinesPerformance method) test_get_cpl_throughput_no_file() (CIME.tests.test_unit_baselines_performance.TestUnitBaselinesPerformance method) test_get_grid_info_3glc() (CIME.tests.test_unit_grids.TestGrids method) test_get_grid_info_basic() (CIME.tests.test_unit_grids.TestGrids method) test_get_grid_info_extra_gridmaps() (CIME.tests.test_unit_grids.TestGrids method) test_get_grid_info_extra_required_gridmaps() (CIME.tests.test_unit_grids.TestGrids method) test_get_job_deps() (CIME.tests.test_unit_xml_env_batch.TestXMLEnvBatch method) test_get_latest_cpl_logs() (CIME.tests.test_unit_baselines_performance.TestUnitBaselinesPerformance method) test_get_latest_cpl_logs_found_multiple() (CIME.tests.test_unit_baselines_performance.TestUnitBaselinesPerformance method) test_get_latest_cpl_logs_found_single() (CIME.tests.test_unit_baselines_performance.TestUnitBaselinesPerformance method) test_get_latest_phase() (CIME.tests.test_unit_test_status.TestTestStatus method) test_get_mpirun() (CIME.tests.test_unit_xml_env_mach_specific.TestXMLEnvMachSpecific method) test_get_queue_specs() (CIME.tests.test_unit_xml_env_batch.TestXMLEnvBatch method) test_get_submit_args() (CIME.tests.test_unit_xml_env_batch.TestXMLEnvBatch method) test_get_submit_args_job_queue() (CIME.tests.test_unit_xml_env_batch.TestXMLEnvBatch method) test_h_primary_component() (CIME.tests.test_sys_create_newcase.TestCreateNewcase method) test_has_batch_system() (CIME.tests.test_unit_xml_machines.TestUnitXMLMachines method) test_hist_only() (CIME.tests.test_unit_compare_test_results.TestCaseFake method) test_ignore() (CIME.tests.test_unit_config.TestConfig method) test_import_and_run_sub_or_cmd() (CIME.tests.test_unit_utils.TestUtils method) test_import_and_run_sub_or_cmd_cime_py() (CIME.tests.test_unit_utils.TestUtils method) test_import_and_run_sub_or_cmd_import() (CIME.tests.test_unit_utils.TestUtils method) test_import_and_run_sub_or_cmd_run() (CIME.tests.test_unit_utils.TestUtils method) test_import_barfoo() (CIME.tests.test_unit_utils.TestLineDefinesPythonFunction method) test_import_foo() (CIME.tests.test_unit_utils.TestLineDefinesPythonFunction method) test_import_foo_indented() (CIME.tests.test_unit_utils.TestLineDefinesPythonFunction method) test_import_foo_space() (CIME.tests.test_unit_utils.TestLineDefinesPythonFunction method) test_import_foo_then_others() (CIME.tests.test_unit_utils.TestLineDefinesPythonFunction method) test_import_foobar() (CIME.tests.test_unit_utils.TestLineDefinesPythonFunction method) test_import_from_file() (CIME.tests.test_unit_utils.TestUtils method) test_import_others_then_foo() (CIME.tests.test_unit_utils.TestLineDefinesPythonFunction method) test_include() (CIME.tests.test_unit_user_mod_support.TestUserModSupport method) test_indent_string_multiline() (CIME.tests.test_unit_utils.TestIndentStr method) test_indent_string_singleline() (CIME.tests.test_unit_utils.TestIndentStr method) test_init() (CIME.tests.test_unit_case.TestCase_RecordCmd method) test_init_data() (CIME.tests.test_unit_paramgen.TestParamGen method)

test_init_defaults() (CIME.tests.test_unit_nmlgen.TestNamelistGenerator method) test_init_path() (CIME.tests.test_unit_xml_env_mach_specific.TestXMLEnvMachSpecific method) test_input_data_list() (CIME.tests.test_unit_paramgen.TestParamGenYamlConstructor method) test_internal_calls_multisubmit_failed_state() (CIME.tests.test_unit_compare_two.TestSystemTestsCompareTwo method) test_invalid_file() (CIME.tests.test_unit_expected_fails_file.TestExpectedFailsFile method) test_is_bless_needed() (CIME.tests.test_unit_bless_test_results.TestUnitBlessTestResults method) test_is_bless_needed_baseline_fail() (CIME.tests.test_unit_bless_test_results.TestUnitBlessTestResults method) test_is_bless_needed_no_run_phase() (CIME.tests.test_unit_bless_test_results.TestUnitBlessTestResults method) test_is_bless_needed_no_skip_fail() (CIME.tests.test_unit_bless_test_results.TestUnitBlessTestResults method) test_is_bless_needed_overall_fail() (CIME.tests.test_unit_bless_test_results.TestUnitBlessTestResults method) test_is_bless_needed_run_phase_fail() (CIME.tests.test_unit_bless_test_results.TestUnitBlessTestResults method) test_is_locked() (CIME.tests.test_unit_locked_files.TestLockedFiles method) test_is_valid_compiler() (CIME.tests.test_unit_xml_machines.TestUnitXMLMachines method) test_is_valid_MPIlib() (CIME.tests.test_unit_xml_machines.TestUnitXMLMachines method) test_j_createnewcase_user_compset_vs_alias() (CIME.tests.test_sys_create_newcase.TestCreateNewcase method) test_jenkins_generic_job() (CIME.tests.test_sys_jenkins_generic_job.TestJenkinsGenericJob method) test_jenkins_generic_job_kill() (CIME.tests.test_sys_jenkins_generic_job.TestJenkinsGenericJob method) test_jenkins_generic_job_realistic_dash() (CIME.tests.test_sys_jenkins_generic_job.TestJenkinsGenericJob method) test_jenkins_generic_job_save_timing() (CIME.tests.test_sys_jenkins_generic_job.TestJenkinsGenericJob method) test_k_append_config() (CIME.tests.test_sys_create_newcase.TestCreateNewcase method) test_ka_createnewcase_extra_machines_dir() (CIME.tests.test_sys_create_newcase.TestCreateNewcase method) test_keepexe() (CIME.tests.test_unit_user_mod_support.TestUserModSupport method) test_kwargs() (CIME.tests.test_unit_system_tests.TestUnitSystemTests method) test_lib_docs() (CIME.tests.test_unit_doctest.TestDocs method) test_load() (CIME.tests.test_unit_config.TestConfig method) test_lock_file() (CIME.tests.test_unit_locked_files.TestLockedFiles method) test_lock_file_error_path() (CIME.tests.test_unit_locked_files.TestLockedFiles method) test_lock_file_newname() (CIME.tests.test_unit_locked_files.TestLockedFiles method) test_m_createnewcase_alternate_drivers() (CIME.tests.test_sys_create_newcase.TestCreateNewcase method) test_match() (CIME.tests.test_unit_paramgen.TestParamGen method) test_match_files() (CIME.tests.test_unit_xml_archive_base.TestXMLArchiveBase method) test_mixed_guard() (CIME.tests.test_unit_paramgen.TestParamGenXmlConstructor method) test_mixed_guard_first() (CIME.tests.test_unit_paramgen.TestParamGenXmlConstructor method) test_mom_input() (CIME.tests.test_unit_paramgen.TestParamGenYamlConstructor method) TEST_MPILIB (CIME.tests.base.BaseTestCase attribute) test_multiple_files() (CIME.tests.test_unit_bless_test_results.TestUnitBlessTestResults method) test_mvk() (CIME.tests.test_unit_system_tests_mvk.TestSystemTestsMVK method) test_n_createnewcase_bad_compset() (CIME.tests.test_sys_create_newcase.TestCreateNewcase method) test_namelists_only() (CIME.tests.test_unit_compare_test_results.TestCaseFake method) test_nested_reduce() (CIME.tests.test_unit_paramgen.TestParamGen method) test_new_hash() (CIME.tests.test_unit_case.TestCase method) test_no_match() (CIME.tests.test_unit_paramgen.TestParamGenXmlConstructor method) test_no_skip_pass() (CIME.tests.test_unit_bless_test_results.TestUnitBlessTestResults method) test_outer_guards() (CIME.tests.test_unit_paramgen.TestParamGen method) test_overwrite() (CIME.tests.test_unit_config.TestConfig method) test_perf_compare_memory_baseline() (CIME.tests.test_unit_baselines_performance.TestUnitBaselinesPerformance method) test_perf_compare_memory_baseline_above_threshold() (CIME.tests.test_unit_baselines_performance.TestUnitBaselinesPerformance method) test_perf_compare_memory_baseline_no_baseline() (CIME.tests.test_unit_baselines_performance.TestUnitBaselinesPerformance method) test_perf_compare_memory_baseline_no_baseline_file() (CIME.tests.test_unit_baselines_performance.TestUnitBaselinesPerformance method) test_perf_compare_memory_baseline_no_tolerance() (CIME.tests.test_unit_baselines_performance.TestUnitBaselinesPerformance method) test_perf_compare_memory_baseline_not_enough_samples() (CIME.tests.test_unit_baselines_performance.TestUnitBaselinesPerformance method) test_perf_compare_throughput_baseline() (CIME.tests.test_unit_baselines_performance.TestUnitBaselinesPerformance method) test_perf_compare_throughput_baseline_above_threshold() (CIME.tests.test_unit_baselines_performance.TestUnitBaselinesPerformance method) test_perf_compare_throughput_baseline_no_baseline() (CIME.tests.test_unit_baselines_performance.TestUnitBaselinesPerformance method) test_perf_compare_throughput_baseline_no_baseline_file() (CIME.tests.test_unit_baselines_performance.TestUnitBaselinesPerformance method) test_perf_compare_throughput_baseline_no_tolerance() (CIME.tests.test_unit_baselines_performance.TestUnitBaselinesPerformance method) test_perf_get_memory() (CIME.tests.test_unit_baselines_performance.TestUnitBaselinesPerformance method) test_perf_get_memory_default() (CIME.tests.test_unit_baselines_performance.TestUnitBaselinesPerformance method) test_perf_get_throughput() (CIME.tests.test_unit_baselines_performance.TestUnitBaselinesPerformance method) test_perf_get_throughput_default() (CIME.tests.test_unit_baselines_performance.TestUnitBaselinesPerformance method) test_perf_write_baseline() (CIME.tests.test_unit_baselines_performance.TestUnitBaselinesPerformance method) test_post_run_check() (CIME.tests.test_unit_case_run.TestCaseSubmit method) test_post_run_check_no_termination() (CIME.tests.test_unit_case_run.TestCaseSubmit method) test_psdump_corePhasesPass() (CIME.tests.test_unit_test_status.TestTestStatus method) test_psdump_oneCorePhaseFails() (CIME.tests.test_unit_test_status.TestTestStatus method) test_psdump_oneCorePhaseFailsAbsentFromXFails() (CIME.tests.test_unit_test_status.TestTestStatus method) test_psdump_oneCorePhaseFailsInXFails() (CIME.tests.test_unit_test_status.TestTestStatus method) test_psdump_oneCorePhasePassesInXFails() (CIME.tests.test_unit_test_status.TestTestStatus method) test_psdump_skipPasses() (CIME.tests.test_unit_test_status.TestTestStatus method) test_psdump_unexpectedPass_shouldBePresent() (CIME.tests.test_unit_test_status.TestTestStatus method) test_query_components() (CIME.tests.test_sys_query_config.TestQueryConfig method) test_query_compsets() (CIME.tests.test_sys_query_config.TestQueryConfig method) test_query_grids() (CIME.tests.test_sys_query_config.TestQueryConfig method) test_query_machines() (CIME.tests.test_sys_query_config.TestQueryConfig method) test_query_testlists_count_runs() (CIME.tests.test_sys_manage_and_query.TestManageAndQuery method) test_query_testlists_define_testtypes_runs() (CIME.tests.test_sys_manage_and_query.TestManageAndQuery method) test_query_testlists_list_runs() (CIME.tests.test_sys_manage_and_query.TestManageAndQuery method) test_query_testlists_runs() (CIME.tests.test_sys_manage_and_query.TestManageAndQuery method) test_read_baseline_file_content() (CIME.tests.test_unit_baselines_performance.TestUnitBaselinesPerformance method) test_read_baseline_file_multi_line() (CIME.tests.test_unit_baselines_performance.TestUnitBaselinesPerformance method) test_read_config_grids() (CIME.tests.test_unit_xml_grids.TestXMLGrids method) test_rebless_namelist() (CIME.tests.test_sys_bless_tests_results.TestBlessTestResults method) test_reduce() (CIME.tests.test_unit_paramgen.TestParamGen method) test_resetup_case_single_exe() (CIME.tests.test_unit_compare_two.TestSystemTestsCompareTwo method) TEST_ROOT (CIME.tests.base.BaseTestCase attribute) test_run1_fails() (CIME.tests.test_unit_compare_two.TestSystemTestsCompareTwo method) test_run2_fails() (CIME.tests.test_unit_compare_two.TestSystemTestsCompareTwo method) test_run_and_log_case_status() (CIME.tests.test_unit_utils.TestUtils method) test_run_and_log_case_status_case_submit_error_on_batch() (CIME.tests.test_unit_utils.TestUtils method) test_run_and_log_case_status_case_submit_no_batch() (CIME.tests.test_unit_utils.TestUtils method) test_run_and_log_case_status_case_submit_on_batch() (CIME.tests.test_unit_utils.TestUtils method) test_run_and_log_case_status_custom_msg() (CIME.tests.test_unit_utils.TestUtils method) test_run_and_log_case_status_custom_msg_error_on_batch() (CIME.tests.test_unit_utils.TestUtils method) test_run_and_log_case_status_error() (CIME.tests.test_unit_utils.TestUtils method) test_run_phase_internal_calls() (CIME.tests.test_unit_compare_two.TestSystemTestsCompareTwo method) test_run_phase_internal_calls_multisubmit_phase1() (CIME.tests.test_unit_compare_two.TestSystemTestsCompareTwo method) test_run_phase_internal_calls_multisubmit_phase2() (CIME.tests.test_unit_compare_two.TestSystemTestsCompareTwo method) test_run_phase_passes() (CIME.tests.test_unit_compare_two.TestSystemTestsCompareTwo method) test_run_restart() (CIME.tests.test_sys_run_restart.TestRunRestart method) test_run_restart_too_many_fails() (CIME.tests.test_sys_run_restart.TestRunRestart method) test_same_test_appears_twice() (CIME.tests.test_unit_expected_fails_file.TestExpectedFailsFile method) test_save_timings() (CIME.tests.test_sys_save_timings.TestSaveTimings method) test_save_timings_manual() (CIME.tests.test_sys_save_timings.TestSaveTimings method) test_self_build_cprnc() (CIME.tests.test_sys_cime_case.TestCimeCase method) test_set_job_defaults() (CIME.tests.test_unit_xml_env_batch.TestXMLEnvBatch method) test_set_job_defaults_honor_walltimemax() (CIME.tests.test_unit_xml_env_batch.TestXMLEnvBatch method) test_set_job_defaults_honor_walltimemin() (CIME.tests.test_unit_xml_env_batch.TestXMLEnvBatch method) test_set_job_defaults_user_walltime() (CIME.tests.test_unit_xml_env_batch.TestXMLEnvBatch method) test_set_job_defaults_walltimedef() (CIME.tests.test_unit_xml_env_batch.TestXMLEnvBatch method) test_set_job_defaults_walltimemax_none() (CIME.tests.test_unit_xml_env_batch.TestXMLEnvBatch method) test_set_job_defaults_walltimemin_none() (CIME.tests.test_unit_xml_env_batch.TestXMLEnvBatch method) test_set_nodes() (CIME.tests.test_unit_xml_namelist_definition.TestXMLNamelistDefinition method) test_setup() (CIME.tests.test_unit_compare_two.TestSystemTestsCompareTwo method) test_setup_case2_exists() (CIME.tests.test_unit_compare_two.TestSystemTestsCompareTwo method) test_setup_error() (CIME.tests.test_unit_compare_two.TestSystemTestsCompareTwo method) test_setup_separate_builds_sharedlibroot() (CIME.tests.test_unit_compare_two.TestSystemTestsCompareTwo method) test_single_key_val_guard() (CIME.tests.test_unit_paramgen.TestParamGenXmlConstructor method) test_single_submit() (CIME.tests.test_sys_single_submit.TestSingleSubmit method) test_single_test() (CIME.tests.test_unit_cs_status.TestCsStatus method) test_specific() (CIME.tests.test_unit_bless_test_results.TestUnitBlessTestResults method) test_st_archive() (CIME.case.case.Case method) (in module CIME.case.case_st_archive) test_strip_grid_from_name_badname() (CIME.tests.test_unit_grids.TestGridsFunctions method) test_strip_grid_from_name_basic() (CIME.tests.test_unit_grids.TestGridsFunctions method) test_sub_relative() (CIME.tests.test_unit_case.TestCase_RecordCmd method) test_submit() (CIME.tests.test_unit_case.TestCaseSubmit method) test_submit_jobs() (CIME.tests.test_unit_xml_env_batch.TestXMLEnvBatch method) test_submit_jobs_dependency() (CIME.tests.test_unit_xml_env_batch.TestXMLEnvBatch method) test_submit_jobs_single() (CIME.tests.test_unit_xml_env_batch.TestXMLEnvBatch method) test_success_recording() (CIME.tests.test_sys_save_timings.TestSaveTimings method) test_suffix() (CIME.tests.test_unit_xml_archive_base.TestXMLArchiveBase method) test_support_single_exe() (CIME.tests.test_unit_xml_tests.TestXMLTests method) test_support_single_exe_error() (CIME.tests.test_unit_xml_tests.TestXMLTests method) test_testmod_complex() (CIME.tests.test_unit_system_tests_mvk.TestSystemTestsMVK method) test_testmod_simple() (CIME.tests.test_unit_system_tests_mvk.TestSystemTestsMVK method) test_testmods() (CIME.tests.test_sys_test_scheduler.TestTestScheduler method) test_testmods_malformed() (CIME.tests.test_sys_test_scheduler.TestTestScheduler method) test_testmods_missing() (CIME.tests.test_sys_test_scheduler.TestTestScheduler method) test_to_string() (in module CIME.test_utils) test_two_applications() (CIME.tests.test_unit_user_mod_support.TestUserModSupport method) test_two_tests() (CIME.tests.test_unit_cs_status.TestCsStatus method) test_undefined_var() (CIME.tests.test_unit_paramgen.TestParamGen method) test_unlock_file() (CIME.tests.test_unit_locked_files.TestLockedFiles method) test_unlock_file_error_path() (CIME.tests.test_unit_locked_files.TestLockedFiles method) test_update_testlog() (CIME.tests.test_unit_system_tests_mvk.TestSystemTestsMVK method) test_update_testlog_htmlroot() (CIME.tests.test_unit_system_tests_mvk.TestSystemTestsMVK method) test_update_testlog_urlroot_None() (CIME.tests.test_unit_system_tests_mvk.TestSystemTestsMVK method) test_user_concurrent_mods() (CIME.tests.test_sys_user_concurrent_mods.TestUserConcurrentMods method) test_wait_for_test_all_pass() (CIME.tests.test_sys_wait_for_tests.TestWaitForTests method) test_wait_for_test_cdash_kill() (CIME.tests.test_sys_wait_for_tests.TestWaitForTests method) test_wait_for_test_cdash_pass() (CIME.tests.test_sys_wait_for_tests.TestWaitForTests method) test_wait_for_test_no_wait() (CIME.tests.test_sys_wait_for_tests.TestWaitForTests method) test_wait_for_test_test_status_integration_pass() (CIME.tests.test_sys_wait_for_tests.TestWaitForTests method) test_wait_for_test_test_status_integration_submit_fail() (CIME.tests.test_sys_wait_for_tests.TestWaitForTests method) test_wait_for_test_timeout() (CIME.tests.test_sys_wait_for_tests.TestWaitForTests method) test_wait_for_test_wait_for_missing_run_phase() (CIME.tests.test_sys_wait_for_tests.TestWaitForTests method) test_wait_for_test_wait_for_pend() (CIME.tests.test_sys_wait_for_tests.TestWaitForTests method) test_wait_for_test_wait_kill() (CIME.tests.test_sys_wait_for_tests.TestWaitForTests method) test_wait_for_test_with_fail() (CIME.tests.test_sys_wait_for_tests.TestWaitForTests method) test_write_baseline_file() (CIME.tests.test_unit_baselines_performance.TestUnitBaselinesPerformance method) test_write_baseline_runtimeerror() (CIME.tests.test_unit_baselines_performance.TestUnitBaselinesPerformance method) test_write_baseline_skip() (CIME.tests.test_unit_baselines_performance.TestUnitBaselinesPerformance method) test_xml_caching() (CIME.tests.test_sys_cime_case.TestCimeCase method) TestBlessTestResults (class in CIME.tests.test_sys_bless_tests_results) TESTBUILDFAIL (class in CIME.SystemTests.system_tests_common) TESTBUILDFAILEXC (class in CIME.SystemTests.system_tests_common) TestBuildSystem (class in CIME.tests.test_sys_build_system) TestCase (class in CIME.tests.test_unit_case) TestCase_RecordCmd (class in CIME.tests.test_unit_case) TestCaseFake (class in CIME.tests.test_unit_case_fake) (class in CIME.tests.test_unit_compare_test_results) TestCaseSetup (class in CIME.tests.test_unit_case_setup) TestCaseSubmit (class in CIME.tests.test_unit_case) (class in CIME.tests.test_unit_case_run) TestCimeCase (class in CIME.tests.test_sys_cime_case) TestCimePerformance (class in CIME.tests.test_sys_cime_performance) TestComponentGrids (class in CIME.tests.test_unit_grids) TestConfig (class in CIME.tests.test_unit_config) TestCreateNewcase (class in CIME.tests.test_sys_create_newcase) TestCsStatus (class in CIME.tests.test_unit_cs_status) TestCustomAssertions (class in CIME.tests.test_unit_custom_assertions_test_status) TestDocs (class in CIME.tests.test_unit_doctest) TestExpectedFailsFile (class in CIME.tests.test_unit_expected_fails_file) TestFileContainsPythonFunction (class in CIME.tests.test_unit_utils) TestFullSystem (class in CIME.tests.test_sys_full_system) TestGridGeneration (class in CIME.tests.test_sys_grid_generation) TestGrids (class in CIME.tests.test_unit_grids) TestGridsFunctions (class in CIME.tests.test_unit_grids) TestHistUtils (class in CIME.tests.test_unit_hist_utils) TestIndentStr (class in CIME.tests.test_unit_utils) TestJenkinsGenericJob (class in CIME.tests.test_sys_jenkins_generic_job) TestLineDefinesPythonFunction (class in CIME.tests.test_unit_utils) TestLinkToCase2Output (class in CIME.tests.test_unit_two_link_to_case2_output) Testlist (class in CIME.XML.testlist) TestLockedFiles (class in CIME.tests.test_unit_locked_files) TestManageAndQuery (class in CIME.tests.test_sys_manage_and_query) TESTMEMLEAKFAIL (class in CIME.SystemTests.system_tests_common) TESTMEMLEAKPASS (class in CIME.SystemTests.system_tests_common) TestNamelistGenerator (class in CIME.tests.test_unit_nmlgen) TestParamGen (class in CIME.tests.test_unit_paramgen) TestParamGenXmlConstructor (class in CIME.tests.test_unit_paramgen) TestParamGenYamlConstructor (class in CIME.tests.test_unit_paramgen) TestQueryConfig (class in CIME.tests.test_sys_query_config) TestReporter (class in CIME.XML.test_reporter) TESTRUNDIFF (class in CIME.SystemTests.system_tests_common) TESTRUNDIFFRESUBMIT (class in CIME.SystemTests.system_tests_common) TESTRUNFAIL (class in CIME.SystemTests.system_tests_common) TESTRUNFAILEXC (class in CIME.SystemTests.system_tests_common) TESTRUNFAILRESET (class in CIME.SystemTests.system_tests_common) TESTRUNPASS (class in CIME.SystemTests.system_tests_common) TestRunRestart (class in CIME.tests.test_sys_run_restart) TESTRUNSLOWPASS (class in CIME.SystemTests.system_tests_common) TESTRUNSTARCFAIL (class in CIME.SystemTests.system_tests_common) TESTRUNUSERXMLCHANGE (class in CIME.SystemTests.system_tests_common) Tests (class in CIME.XML.tests) TestSaveTimings (class in CIME.tests.test_sys_save_timings) TestScheduler (class in CIME.test_scheduler) TestSingleSubmit (class in CIME.tests.test_sys_single_submit) TestSpec (class in CIME.XML.testspec) TestStatus (class in CIME.test_status) TestSystemTestsCompareTwo (class in CIME.tests.test_unit_compare_two) TestSystemTestsMVK (class in CIME.tests.test_unit_system_tests_mvk) TESTTESTDIFF (class in CIME.SystemTests.system_tests_common) TestTestScheduler (class in CIME.tests.test_sys_test_scheduler) TestTestStatus (class in CIME.tests.test_unit_test_status) TestUnitAprun (class in CIME.tests.test_unit_aprun) TestUnitBaselinesPerformance (class in CIME.tests.test_unit_baselines_performance) TestUnitBlessTestResults (class in CIME.tests.test_unit_bless_test_results) TestUnitSystemTests (class in CIME.tests.test_unit_system_tests) TestUnitTest (class in CIME.tests.test_sys_unittest) TestUnitXMLMachines (class in CIME.tests.test_unit_xml_machines) TestUserConcurrentMods (class in CIME.tests.test_sys_user_concurrent_mods) TestUserModSupport (class in CIME.tests.test_unit_user_mod_support) TestUserNLCopier (class in CIME.tests.test_unit_user_nl_utils) TestUtils (class in CIME.tests.test_unit_utils) TestWaitForTests (class in CIME.tests.test_sys_wait_for_tests) TestXMLArchiveBase (class in CIME.tests.test_unit_xml_archive_base) TestXMLEnvBatch (class in CIME.tests.test_unit_xml_env_batch) TestXMLEnvMachSpecific (class in CIME.tests.test_unit_xml_env_mach_specific) TestXMLGrids (class in CIME.tests.test_unit_xml_grids) TestXMLNamelistDefinition (class in CIME.tests.test_unit_xml_namelist_definition) TestXMLTests (class in CIME.tests.test_unit_xml_tests) text() (CIME.XML.generic_xml.GenericXML method) threaded_test() (CIME.tests.test_sys_jenkins_generic_job.TestJenkinsGenericJob method) (CIME.tests.test_sys_wait_for_tests.TestWaitForTests method) Timeout (class in CIME.utils) to_string() (CIME.XML.generic_xml.GenericXML method) Tools module Tools.generate_cylc_workflow module Tools.standard_script_setup module Tools.testreporter module TOOLS_DIR (CIME.tests.base.BaseTestCase attribute) touch() (in module CIME.utils) transform_vars() (in module CIME.utils) tree (CIME.XML.generic_xml.GenericXML.CacheEntry attribute) TSC (class in CIME.SystemTests.tsc) typed_os_environ() (in module CIME.tests.base)

U

unit testing unlock() (CIME.XML.generic_xml.GenericXML method) unlock_file() (in module CIME.locked_files) update_env() (CIME.case.case.Case method)

update_shr_strdata_nml() (CIME.nmlgen.NamelistGenerator method) update_test_status() (CIME.XML.testspec.TestSpec method) update_testlog() (CIME.SystemTests.mvk.MVK method) user namelist files (CASEROOT/user_nl_*) uses_kokkos() (in module CIME.build)

V

valid_compset() (CIME.case.case.Case method) validate() (CIME.XML.namelist_definition.NamelistDefinition method) validate_timestamp() (CIME.XML.generic_xml.GenericXML method)

validate_xml_file() (CIME.XML.generic_xml.GenericXML method) verbatim_success_msg() (in module CIME.utils) verify_chksum() (in module CIME.case.check_input_data) verify_perms() (CIME.tests.base.BaseTestCase method)

W

wait_for_test() (in module CIME.wait_for_tests) wait_for_tests() (in module CIME.wait_for_tests) wait_for_tests_impl() (in module CIME.wait_for_tests) wait_for_unlocked() (in module CIME.utils) WGET (class in CIME.Servers.wget) wget_login() (CIME.Servers.wget.WGET class method) Workflow (class in CIME.XML.workflow) write() (CIME.namelist.Namelist method) (CIME.XML.generic_xml.GenericXML method) write_baseline_file() (in module CIME.baselines.performance)

write_config_grids() (in module CIME.tests.test_unit_xml_grids) write_evv_output() (in module CIME.tests.test_unit_system_tests_mvk) write_modelio_file() (CIME.nmlgen.NamelistGenerator method) write_nuopc() (CIME.namelist.Namelist method) write_nuopc_config_file() (CIME.nmlgen.NamelistGenerator method) write_nuopc_modelio_file() (CIME.nmlgen.NamelistGenerator method) write_output_file() (CIME.nmlgen.NamelistGenerator method) write_provenance_info() (in module CIME.tests.scripts_regression_tests) write_seq_maps() (CIME.nmlgen.NamelistGenerator method) write_user_nl_file() (CIME.tests.test_unit_user_nl_utils.TestUserNLCopier method)

X

XML files

xml_to_make_variable() (in module CIME.build)

Y

year() (CIME.date.date method)